Variant report

Variant	rs8013627
Chromosome Location	chr14:85720403-85720404
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:85716141..85718309-chr14:85719086..85721853,2	MCF-7	breast:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10498583	0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11626130	0.81[CEU][hapmap];0.90[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs11846871	0.91[ASN][1000 genomes]
rs12050312	0.82[CHB][hapmap]
rs12147907	0.81[EUR][1000 genomes]
rs12897361	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1375570	0.84[ASN][1000 genomes]
rs1449414	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1562696	0.90[ASN][1000 genomes]
rs1667498	0.90[ASN][1000 genomes]
rs1667505	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs1667507	0.84[ASN][1000 genomes]
rs1667508	0.84[ASN][1000 genomes]
rs17201769	0.81[CEU][hapmap];0.80[EUR][1000 genomes]
rs1767418	0.81[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.90[ASN][1000 genomes]
rs17796627	0.80[EUR][1000 genomes]
rs17796693	0.91[EUR][1000 genomes]
rs34144829	0.91[EUR][1000 genomes]
rs34880356	0.89[EUR][1000 genomes]
rs34980802	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35112032	0.80[EUR][1000 genomes]
rs35927240	0.80[EUR][1000 genomes]
rs36073512	0.88[EUR][1000 genomes]
rs6574806	0.90[ASN][1000 genomes]
rs6574807	0.94[ASN][1000 genomes]
rs66792363	0.81[EUR][1000 genomes]
rs7158452	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72687573	0.87[ASN][1000 genomes]
rs72687574	0.82[ASN][1000 genomes]
rs72687576	0.87[ASN][1000 genomes]
rs72687577	0.87[ASN][1000 genomes]
rs72687585	0.97[ASN][1000 genomes]
rs72687586	0.82[EUR][1000 genomes]
rs8008671	0.87[EUR][1000 genomes]
rs8017958	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8017968	0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs895908	0.86[ASN][1000 genomes]
rs9323754	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85717200-85727800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr14:85717400-85723400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr14:85717800-85720600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr14:85720400-85720600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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