Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11846871	0.94[ASN][1000 genomes]
rs12050312	1.00[CHB][hapmap]
rs12897361	0.81[ASN][1000 genomes]
rs1375570	0.94[ASN][1000 genomes]
rs1449414	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1449415	0.83[ASN][1000 genomes]
rs1562696	0.94[ASN][1000 genomes]
rs1667498	0.94[ASN][1000 genomes]
rs1667505	0.82[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1667507	0.94[ASN][1000 genomes]
rs1667508	0.94[ASN][1000 genomes]
rs6574806	0.94[ASN][1000 genomes]
rs6574807	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7158452	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72687573	0.90[ASN][1000 genomes]
rs72687574	0.91[ASN][1000 genomes]
rs72687576	0.90[ASN][1000 genomes]
rs72687577	0.90[ASN][1000 genomes]
rs72687585	0.87[ASN][1000 genomes]
rs8013627	0.90[ASN][1000 genomes]
rs8017958	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8017968	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs895908	0.83[ASN][1000 genomes]
rs9323754	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401331	chr14:85332747-85716351	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832846	chr14:85517736-85715650	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv902168	chr14:85693904-85716792	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85701200-85715200	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr14:85706200-85715600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr14:85707200-85710800	Enhancers	Fetal Brain Male	brain
4	chr14:85707200-85710800	Enhancers	Fetal Brain Female	brain
5	chr14:85707400-85709800	Enhancers	Fetal Heart	heart
6	chr14:85707400-85710400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr14:85707600-85713800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:85707800-85709400	Enhancers	HSMMtube	muscle
9	chr14:85707800-85710000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr14:85708200-85713200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr14:85708200-85715400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr14:85708400-85716000	Weak transcription	Ovary	ovary
13	chr14:85709000-85715400	Weak transcription	Fetal Muscle Leg	muscle

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