Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10444865	0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.90[ASN][1000 genomes]
rs11632681	0.89[ASN][1000 genomes]
rs11635872	0.82[ASN][1000 genomes]
rs12232307	0.89[ASN][1000 genomes]
rs12439483	0.89[ASN][1000 genomes]
rs12591832	0.87[ASN][1000 genomes]
rs12906317	0.88[ASN][1000 genomes]
rs12911934	0.91[JPT][hapmap]
rs12917029	0.88[ASN][1000 genomes]
rs13313465	0.89[ASN][1000 genomes]
rs1458883	0.88[ASN][1000 genomes]
rs16960582	0.89[ASN][1000 genomes]
rs16960585	0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2166157	0.90[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs4597271	0.82[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs4924607	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs59469657	0.89[ASN][1000 genomes]
rs59766603	0.89[ASN][1000 genomes]
rs67156387	0.89[ASN][1000 genomes]
rs8024405	0.86[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs8026065	0.86[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs8027994	0.86[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs8031065	0.86[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs9972525	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350109	chr15:34668106-35534229	Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
2	nsv904073	chr15:35467096-35686267	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:35484200-35502000	Weak transcription	Left Ventricle	heart
2	chr15:35484400-35486600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr15:35485000-35488000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr15:35485000-35488600	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr15:35485200-35488200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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