Variant report

Variant rs12905838
Chromosome Location chr15:92571476-92571477
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92555600-92576200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr15:92562800-92574600 Weak transcription Esophagus oesophagus
3 chr15:92565200-92572000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr15:92565200-92573400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr15:92565400-92572400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr15:92566200-92576400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr15:92567600-92573000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr15:92567800-92571600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr15:92568600-92571800 Enhancers Right Ventricle heart
10 chr15:92568800-92572400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr15:92569200-92572600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr15:92569400-92573000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr15:92569800-92573000 Weak transcription Brain Cingulate Gyrus brain
14 chr15:92569800-92576600 Weak transcription Brain Anterior Caudate brain
15 chr15:92570400-92572000 Enhancers Brain Inferior Temporal Lobe brain
16 chr15:92570600-92571600 Enhancers Spleen Spleen
17 chr15:92570600-92572200 Enhancers Brain Angular Gyrus brain
18 chr15:92570600-92572600 Enhancers Skeletal Muscle Male skeletal muscle
19 chr15:92570600-92574200 Enhancers Adipose Nuclei Adipose
20 chr15:92570600-92578000 Enhancers Right Atrium heart
21 chr15:92570800-92571600 Enhancers Lung lung
22 chr15:92570800-92571800 Enhancers Skeletal Muscle Female skeletal muscle
23 chr15:92570800-92573800 Enhancers Fetal Lung lung
24 chr15:92570800-92573800 Enhancers Left Ventricle heart
25 chr15:92570800-92574000 Enhancers Ovary ovary
26 chr15:92571000-92571600 Enhancers Stomach Smooth Muscle stomach
27 chr15:92571000-92571800 Enhancers Aorta Aorta
28 chr15:92571000-92574000 Weak transcription Pancreas Pancrea
29 chr15:92571000-92576800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr15:92571000-92578000 Enhancers Brain Hippocampus Middle brain
31 chr15:92571200-92571800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr15:92571200-92572400 Enhancers Fetal Heart heart
33 chr15:92571200-92572800 Enhancers Fetal Brain Male brain
34 chr15:92571200-92575400 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr15:92571400-92571800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr15:92571400-92571800 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr15:92571400-92572200 Enhancers Small Intestine intestine
38 chr15:92571400-92572800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
39 chr15:92571400-92573200 Weak transcription Brain Substantia Nigra brain
40 chr15:92571400-92573400 Enhancers Fetal Muscle Leg muscle
41 chr15:92571400-92574600 Weak transcription H1 Cell Line embryonic stem cell

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