Variant report
| Variant | rs1292751 |
|---|---|
| Chromosome Location | chr21:16118465-16118466 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000155307 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs1011868 | 0.91[ASN][1000 genomes] |
| rs1011869 | 0.91[ASN][1000 genomes] |
| rs11700788 | 0.91[ASN][1000 genomes] |
| rs11701060 | 0.91[ASN][1000 genomes] |
| rs11701668 | 0.91[ASN][1000 genomes] |
| rs11701709 | 0.84[ASN][1000 genomes] |
| rs11701752 | 0.91[ASN][1000 genomes] |
| rs11701758 | 0.91[ASN][1000 genomes] |
| rs11702307 | 0.90[ASN][1000 genomes] |
| rs1292750 | 0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
| rs13046554 | 0.91[ASN][1000 genomes] |
| rs13049928 | 0.91[ASN][1000 genomes] |
| rs13050255 | 0.91[ASN][1000 genomes] |
| rs2007558 | 0.90[ASN][1000 genomes] |
| rs2403804 | 1.00[ASN][1000 genomes] |
| rs2446696 | 0.88[ASN][1000 genomes] |
| rs2822873 | 0.91[ASN][1000 genomes] |
| rs2822874 | 0.91[ASN][1000 genomes] |
| rs2822875 | 0.91[ASN][1000 genomes] |
| rs2822876 | 0.91[ASN][1000 genomes] |
| rs2822877 | 0.91[ASN][1000 genomes] |
| rs2822878 | 0.97[ASN][1000 genomes] |
| rs2822883 | 0.97[ASN][1000 genomes] |
| rs2822884 | 0.97[ASN][1000 genomes] |
| rs2822885 | 0.99[ASN][1000 genomes] |
| rs2822886 | 0.99[ASN][1000 genomes] |
| rs34595740 | 0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs460240 | 0.84[ASN][1000 genomes] |
| rs460246 | 0.83[ASN][1000 genomes] |
| rs467364 | 0.84[ASN][1000 genomes] |
| rs62218099 | 0.91[ASN][1000 genomes] |
| rs62218100 | 0.90[ASN][1000 genomes] |
| rs62218101 | 0.91[ASN][1000 genomes] |
| rs7280249 | 0.90[ASN][1000 genomes] |
| rs7280684 | 0.90[ASN][1000 genomes] |
| rs7281408 | 0.90[ASN][1000 genomes] |
| rs7281420 | 0.90[ASN][1000 genomes] |
| rs8130742 | 1.00[ASN][1000 genomes] |
| rs8132570 | 0.93[ASN][1000 genomes] |
| rs9983243 | 0.97[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr21:16116800-16118800 | Enhancers | K562 | blood |
| 2 | chr21:16117800-16118600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
