Variant report

Variant	rs2403804
Chromosome Location	chr21:16118359-16118360
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16117024..16119518-chr21:16121656..16124213,2	K562	blood:
2	chr21:15916867..15918691-chr21:16117808..16121145,3	K562	blood:

Variant related genes	Relation type
ENSG00000155307	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1011868	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1011869	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11700788	0.91[ASN][1000 genomes]
rs11701060	0.91[ASN][1000 genomes]
rs11701668	0.91[ASN][1000 genomes]
rs11701709	0.84[ASN][1000 genomes]
rs11701752	0.91[ASN][1000 genomes]
rs11701758	0.91[ASN][1000 genomes]
rs11702307	0.90[ASN][1000 genomes]
rs1292751	1.00[ASN][1000 genomes]
rs13046554	0.91[ASN][1000 genomes]
rs13049928	0.91[ASN][1000 genomes]
rs13050255	0.91[ASN][1000 genomes]
rs2007558	0.90[ASN][1000 genomes]
rs2446696	0.88[ASN][1000 genomes]
rs2822873	0.91[ASN][1000 genomes]
rs2822874	0.91[ASN][1000 genomes]
rs2822875	0.91[ASN][1000 genomes]
rs2822876	0.91[ASN][1000 genomes]
rs2822877	0.91[ASN][1000 genomes]
rs2822878	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2822883	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2822884	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2822885	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822886	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822888	0.86[AFR][1000 genomes]
rs2822889	0.86[AFR][1000 genomes]
rs2822890	0.86[AFR][1000 genomes]
rs34595740	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs460240	0.84[ASN][1000 genomes]
rs460246	0.83[ASN][1000 genomes]
rs467364	0.84[ASN][1000 genomes]
rs62218099	0.91[ASN][1000 genomes]
rs62218100	0.90[ASN][1000 genomes]
rs62218101	0.91[ASN][1000 genomes]
rs7280249	0.90[ASN][1000 genomes]
rs7280684	0.90[ASN][1000 genomes]
rs7281408	0.90[ASN][1000 genomes]
rs7281420	0.90[ASN][1000 genomes]
rs8130742	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132570	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9983243	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16116800-16118800	Enhancers	K562	blood
2	chr21:16117800-16118600	Enhancers	Rectal Mucosa Donor 31	rectum

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