Variant report

Variant rs12938535
Chromosome Location chr17:66593913-66593914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:66578200-66594000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr17:66585400-66594200 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr17:66587800-66594000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr17:66587800-66594400 Enhancers NHDF-Ad bronchial
5 chr17:66588400-66594400 Weak transcription H1 Cell Line embryonic stem cell
6 chr17:66589400-66594800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr17:66589400-66595800 Weak transcription Brain Angular Gyrus brain
8 chr17:66589600-66595800 Weak transcription Ovary ovary
9 chr17:66590200-66594400 Weak transcription Fetal Kidney kidney
10 chr17:66590200-66595200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr17:66590600-66595200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr17:66591200-66594200 Enhancers HepG2 liver
13 chr17:66591400-66595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr17:66591400-66595800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr17:66591800-66595200 Weak transcription Brain Hippocampus Middle brain
16 chr17:66592000-66594000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr17:66592000-66594400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr17:66592000-66595600 Weak transcription Right Atrium heart
19 chr17:66592600-66595600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr17:66592800-66594400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr17:66592800-66595000 Weak transcription Spleen Spleen
22 chr17:66592800-66595600 Weak transcription Lung lung
23 chr17:66593000-66594000 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr17:66593000-66594000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr17:66593000-66594200 Flanking Active TSS Liver Liver
26 chr17:66593000-66594400 Weak transcription Fetal Heart heart
27 chr17:66593000-66595600 Weak transcription Gastric stomach
28 chr17:66593000-66595800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr17:66593000-66595800 Weak transcription Left Ventricle heart
30 chr17:66593000-66595800 Weak transcription Right Ventricle heart
31 chr17:66593000-66596000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr17:66593200-66594000 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr17:66593200-66594000 Enhancers Osteobl bone
34 chr17:66593200-66594200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr17:66593400-66594400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr17:66593600-66594200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr17:66593600-66594200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr17:66593800-66594000 Flanking Active TSS Fetal Intestine Large intestine
39 chr17:66593800-66594800 Bivalent Enhancer Fetal Muscle Leg muscle
40 chr17:66593800-66595800 Active TSS Placenta Placenta
41 chr17:66593800-66597800 Active TSS iPS-15b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links