Variant report

Variant rs12947816
Chromosome Location chr17:66594044-66594045
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:66585400-66594200 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr17:66587800-66594400 Enhancers NHDF-Ad bronchial
3 chr17:66588400-66594400 Weak transcription H1 Cell Line embryonic stem cell
4 chr17:66589400-66594800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:66589400-66595800 Weak transcription Brain Angular Gyrus brain
6 chr17:66589600-66595800 Weak transcription Ovary ovary
7 chr17:66590200-66594400 Weak transcription Fetal Kidney kidney
8 chr17:66590200-66595200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr17:66590600-66595200 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr17:66591200-66594200 Enhancers HepG2 liver
11 chr17:66591400-66595800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr17:66591400-66595800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr17:66591800-66595200 Weak transcription Brain Hippocampus Middle brain
14 chr17:66592000-66594400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr17:66592000-66595600 Weak transcription Right Atrium heart
16 chr17:66592600-66595600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr17:66592800-66594400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr17:66592800-66595000 Weak transcription Spleen Spleen
19 chr17:66592800-66595600 Weak transcription Lung lung
20 chr17:66593000-66594200 Flanking Active TSS Liver Liver
21 chr17:66593000-66594400 Weak transcription Fetal Heart heart
22 chr17:66593000-66595600 Weak transcription Gastric stomach
23 chr17:66593000-66595800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr17:66593000-66595800 Weak transcription Left Ventricle heart
25 chr17:66593000-66595800 Weak transcription Right Ventricle heart
26 chr17:66593000-66596000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr17:66593200-66594200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr17:66593400-66594400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr17:66593600-66594200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr17:66593600-66594200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr17:66593800-66594800 Bivalent Enhancer Fetal Muscle Leg muscle
32 chr17:66593800-66595800 Active TSS Placenta Placenta
33 chr17:66593800-66597800 Active TSS iPS-15b Cell Line embryonic stem cell
34 chr17:66594000-66594200 Enhancers Fetal Intestine Large intestine
35 chr17:66594000-66594200 Enhancers Skeletal Muscle Male skeletal muscle
36 chr17:66594000-66594600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr17:66594000-66594600 Active TSS iPS-18 Cell Line embryonic stem cell
38 chr17:66594000-66594800 Active TSS iPS-20b Cell Line embryonic stem cell
39 chr17:66594000-66595000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr17:66594000-66595200 Flanking Active TSS Osteobl bone
41 chr17:66594000-66595600 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
42 chr17:66594000-66598000 Active TSS ES-WA7 Cell Line embryonic stem cell

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