The 2.0 version of rSNPBase

Variant report

Variant rs12957810
Chromosome Location chr18:12685983-12685984
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12658800-12701800 Weak transcription Placenta Amnion Placenta Amnion
2 chr18:12659000-12700200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr18:12660000-12692600 Weak transcription Brain Cingulate Gyrus brain
4 chr18:12660400-12700800 Weak transcription Fetal Brain Male brain
5 chr18:12662800-12701600 Weak transcription Aorta Aorta
6 chr18:12667000-12701600 Weak transcription Gastric stomach
7 chr18:12668400-12694800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr18:12669200-12694200 Weak transcription A549 lung
9 chr18:12669800-12694200 Weak transcription Hela-S3 cervix
10 chr18:12672200-12701400 Weak transcription Colonic Mucosa Colon
11 chr18:12672400-12687400 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr18:12672400-12697200 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr18:12673200-12701600 Weak transcription Psoas Muscle Psoas
14 chr18:12674200-12693800 Weak transcription NHEK skin
15 chr18:12674600-12693800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr18:12674600-12701600 Weak transcription Right Ventricle heart
17 chr18:12674600-12701600 Weak transcription Small Intestine intestine
18 chr18:12674800-12686200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr18:12674800-12700600 Weak transcription Brain Substantia Nigra brain
20 chr18:12674800-12701400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr18:12675000-12694000 Weak transcription Stomach Mucosa stomach
22 chr18:12676200-12686800 Strong transcription Thymus Thymus
23 chr18:12676600-12686800 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr18:12677000-12686400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr18:12678200-12701400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr18:12678400-12686200 Weak transcription Primary B cells from cord blood blood
27 chr18:12678400-12686200 Weak transcription K562 blood
28 chr18:12678400-12692400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr18:12678400-12692400 Weak transcription Left Ventricle heart
30 chr18:12678400-12693800 Weak transcription HMEC breast
31 chr18:12678400-12694200 Weak transcription Placenta Placenta
32 chr18:12678400-12696800 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr18:12678400-12701200 Weak transcription NH-A brain
34 chr18:12678400-12701600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr18:12678400-12701600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr18:12678400-12701600 Weak transcription HSMMtube muscle
37 chr18:12679600-12686400 Weak transcription Fetal Kidney kidney
38 chr18:12679600-12686800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr18:12679600-12687200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr18:12679600-12687400 Weak transcription Spleen Spleen
41 chr18:12679600-12693800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr18:12679600-12693800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr18:12679600-12696600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr18:12679600-12698400 Weak transcription Duodenum Mucosa Duodenum
45 chr18:12679600-12698400 Weak transcription NHLF lung
46 chr18:12679600-12700400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr18:12679600-12700400 Weak transcription Colon Smooth Muscle Colon
48 chr18:12679600-12700600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr18:12679600-12701000 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr18:12679600-12701000 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015