The 2.0 version of rSNPBase

Variant report

Variant rs2011575
Chromosome Location chr18:12659490-12659491
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12653800-12670400 Weak transcription Dnd41 blood
2 chr18:12655400-12659600 Active TSS Fetal Brain Female brain
3 chr18:12658000-12672800 Weak transcription K562 blood
4 chr18:12658400-12674000 Weak transcription Spleen Spleen
5 chr18:12658600-12662400 Weak transcription Aorta Aorta
6 chr18:12658800-12659800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr18:12658800-12668200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr18:12658800-12671800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr18:12658800-12673400 Weak transcription Primary T cells from cord blood blood
10 chr18:12658800-12674000 Weak transcription Fetal Lung lung
11 chr18:12658800-12674000 Weak transcription Rectal Smooth Muscle rectum
12 chr18:12658800-12679200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr18:12658800-12701800 Weak transcription Placenta Amnion Placenta Amnion
14 chr18:12659000-12659800 Weak transcription Muscle Satellite Cultured Cells --
15 chr18:12659000-12660000 Enhancers Brain Germinal Matrix brain
16 chr18:12659000-12660000 Weak transcription Fetal Intestine Small intestine
17 chr18:12659000-12660000 Weak transcription NHDF-Ad bronchial
18 chr18:12659000-12660000 Weak transcription NHLF lung
19 chr18:12659000-12660200 Weak transcription NHEK skin
20 chr18:12659000-12661200 Weak transcription Fetal Stomach stomach
21 chr18:12659000-12661400 Weak transcription Ovary ovary
22 chr18:12659000-12665000 Weak transcription Stomach Smooth Muscle stomach
23 chr18:12659000-12666800 Weak transcription Fetal Kidney kidney
24 chr18:12659000-12670600 Weak transcription HSMM muscle
25 chr18:12659000-12671800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr18:12659000-12672000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr18:12659000-12672000 Weak transcription Fetal Muscle Trunk muscle
28 chr18:12659000-12672400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr18:12659000-12672400 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr18:12659000-12672400 Weak transcription Duodenum Mucosa Duodenum
31 chr18:12659000-12672400 Weak transcription Placenta Placenta
32 chr18:12659000-12672400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr18:12659000-12672800 Weak transcription NH-A brain
34 chr18:12659000-12673200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr18:12659000-12673200 Weak transcription Brain Substantia Nigra brain
36 chr18:12659000-12673200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr18:12659000-12673400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr18:12659000-12673400 Weak transcription Fetal Muscle Leg muscle
39 chr18:12659000-12673400 Weak transcription Left Ventricle heart
40 chr18:12659000-12674000 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr18:12659000-12674000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr18:12659000-12674000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr18:12659000-12674000 Weak transcription Brain Angular Gyrus brain
44 chr18:12659000-12674000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr18:12659000-12674000 Weak transcription Right Ventricle heart
46 chr18:12659000-12676600 Weak transcription Colon Smooth Muscle Colon
47 chr18:12659000-12679200 Weak transcription Primary hematopoietic stem cells blood
48 chr18:12659000-12679200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr18:12659000-12679400 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr18:12659000-12700200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015