The 2.0 version of rSNPBase

Variant report

Variant rs8097134
Chromosome Location chr18:12639143-12639144
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12607000-12640200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr18:12607800-12651800 Weak transcription Brain Germinal Matrix brain
3 chr18:12616400-12640400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr18:12616400-12644800 Weak transcription Brain Hippocampus Middle brain
5 chr18:12616600-12645200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr18:12621200-12645200 Weak transcription Fetal Muscle Leg muscle
7 chr18:12622800-12645000 Weak transcription Brain Angular Gyrus brain
8 chr18:12625400-12640400 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr18:12626600-12640600 Weak transcription Lung lung
10 chr18:12629800-12640400 Weak transcription HSMMtube muscle
11 chr18:12630400-12645400 Weak transcription Ovary ovary
12 chr18:12630800-12640600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr18:12631000-12640400 Weak transcription Stomach Smooth Muscle stomach
14 chr18:12631000-12645200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr18:12631000-12645200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr18:12631200-12640400 Weak transcription Brain Cingulate Gyrus brain
17 chr18:12631200-12647800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr18:12631400-12645200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr18:12633600-12655800 Weak transcription Fetal Stomach stomach
20 chr18:12635000-12640000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr18:12635000-12645800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr18:12635200-12640600 Weak transcription Gastric stomach
23 chr18:12635200-12645800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr18:12636000-12640400 Weak transcription Hela-S3 cervix
25 chr18:12637200-12640000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr18:12637200-12641200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr18:12637600-12640000 Enhancers A549 lung
28 chr18:12637600-12641200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr18:12637800-12643400 Weak transcription Psoas Muscle Psoas
30 chr18:12637800-12645400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr18:12637800-12652000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr18:12638000-12640800 Weak transcription Right Ventricle heart
33 chr18:12638200-12640000 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr18:12638200-12640400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr18:12638400-12640200 Weak transcription HSMM muscle
36 chr18:12638400-12640200 Weak transcription NH-A brain
37 chr18:12638400-12640600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr18:12638400-12642200 Weak transcription Left Ventricle heart
39 chr18:12638600-12639800 Weak transcription HMEC breast
40 chr18:12638600-12640000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr18:12638600-12640000 Weak transcription Muscle Satellite Cultured Cells --
42 chr18:12638600-12640000 Weak transcription Osteobl bone
43 chr18:12638600-12640400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr18:12638600-12643200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr18:12638800-12639800 Weak transcription NHEK skin
46 chr18:12638800-12640000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr18:12638800-12640000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr18:12638800-12640200 Weak transcription NHDF-Ad bronchial
49 chr18:12638800-12640200 Weak transcription NHLF lung
50 chr18:12638800-12640400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015