Variant report
| Variant | rs12966246 |
|---|---|
| Chromosome Location | chr18:12648199-12648200 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:12607800-12651800 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr18:12633600-12655800 | Weak transcription | Fetal Stomach | stomach |
| 3 | chr18:12637800-12652000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 4 | chr18:12640400-12652000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 5 | chr18:12641000-12648200 | Weak transcription | Hela-S3 | cervix |
| 6 | chr18:12643600-12651800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 7 | chr18:12643800-12653000 | Weak transcription | A549 | lung |
| 8 | chr18:12644400-12651800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 9 | chr18:12645800-12648600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr18:12645800-12649200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 11 | chr18:12646000-12652200 | Weak transcription | NH-A | brain |
| 12 | chr18:12646000-12653000 | Weak transcription | Thymus | Thymus |
| 13 | chr18:12646000-12654000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr18:12646200-12648200 | Weak transcription | HUVEC | blood vessel |
| 15 | chr18:12646200-12648400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr18:12646200-12648400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr18:12646200-12651000 | Weak transcription | Brain Substantia Nigra | brain |
| 18 | chr18:12646200-12651600 | Weak transcription | HSMM | muscle |
| 19 | chr18:12646200-12651600 | Weak transcription | HSMMtube | muscle |
| 20 | chr18:12646200-12651800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 21 | chr18:12646200-12651800 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr18:12646200-12652600 | Weak transcription | HMEC | breast |
| 23 | chr18:12646200-12652800 | Weak transcription | Brain Anterior Caudate | brain |
| 24 | chr18:12646200-12652800 | Weak transcription | K562 | blood |
| 25 | chr18:12646200-12653000 | Weak transcription | Right Atrium | heart |
| 26 | chr18:12646200-12653000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 27 | chr18:12646200-12653000 | Weak transcription | NHLF | lung |
| 28 | chr18:12646200-12657000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 29 | chr18:12646200-12657000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr18:12646400-12651000 | Weak transcription | NHDF-Ad | bronchial |
| 31 | chr18:12646400-12651800 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr18:12646400-12652000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr18:12646400-12652000 | Weak transcription | Fetal Intestine Small | intestine |
| 34 | chr18:12646400-12652200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 35 | chr18:12646400-12652400 | Weak transcription | Brain Angular Gyrus | brain |
| 36 | chr18:12646400-12652800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 37 | chr18:12646400-12652800 | Weak transcription | Ovary | ovary |
| 38 | chr18:12646400-12653000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 39 | chr18:12646400-12653000 | Weak transcription | Fetal Thymus | thymus |
| 40 | chr18:12646400-12653000 | Weak transcription | Psoas Muscle | Psoas |
| 41 | chr18:12646400-12656600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 42 | chr18:12646400-12656600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr18:12646400-12657000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 44 | chr18:12646600-12651400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 45 | chr18:12646600-12651800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 46 | chr18:12646600-12652200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 47 | chr18:12646600-12653000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 48 | chr18:12646800-12652200 | Weak transcription | Fetal Brain Male | brain |
| 49 | chr18:12647000-12651200 | Weak transcription | Fetal Heart | heart |
| 50 | chr18:12647000-12653000 | Weak transcription | Lung | lung |
