The 2.0 version of rSNPBase

Variant report

Variant rs12982030
Chromosome Location chr19:38593652-38593653
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38551200-38613800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr19:38567600-38605400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr19:38573600-38610000 Strong transcription Fetal Intestine Large intestine
4 chr19:38580400-38594800 Weak transcription HSMMtube muscle
5 chr19:38580600-38596000 Weak transcription Stomach Mucosa stomach
6 chr19:38581600-38610000 Weak transcription Psoas Muscle Psoas
7 chr19:38584400-38597000 Weak transcription Right Atrium heart
8 chr19:38584800-38602400 Weak transcription Fetal Brain Male brain
9 chr19:38584800-38602400 Weak transcription Fetal Heart heart
10 chr19:38587000-38605400 Strong transcription Primary B cells from peripheral blood blood
11 chr19:38587200-38603200 Strong transcription Primary B cells from cord blood blood
12 chr19:38587200-38613600 Strong transcription Cortex derived primary cultured neurospheres brain
13 chr19:38587400-38613400 Strong transcription Duodenum Mucosa Duodenum
14 chr19:38588600-38597200 Strong transcription Osteobl bone
15 chr19:38588600-38604000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr19:38588800-38606600 Strong transcription Liver Liver
17 chr19:38589200-38606800 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr19:38589400-38595200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr19:38590000-38593800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr19:38590000-38594000 Strong transcription Rectal Smooth Muscle rectum
21 chr19:38590200-38594000 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr19:38590200-38597200 Strong transcription Gastric stomach
23 chr19:38590200-38605200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr19:38590200-38605800 Strong transcription Adipose Nuclei Adipose
25 chr19:38590200-38606600 Strong transcription Sigmoid Colon Sigmoid Colon
26 chr19:38590200-38606600 Strong transcription Stomach Smooth Muscle stomach
27 chr19:38590200-38611000 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr19:38590400-38594000 Strong transcription Skeletal Muscle Male skeletal muscle
29 chr19:38590400-38595000 Strong transcription Primary T cells fromperipheralblood blood
30 chr19:38590400-38599200 Strong transcription Pancreas Pancrea
31 chr19:38590400-38606400 Strong transcription Fetal Brain Female brain
32 chr19:38590400-38609800 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr19:38590800-38593800 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr19:38590800-38594000 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr19:38590800-38594000 Strong transcription Fetal Muscle Trunk muscle
36 chr19:38590800-38596800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:38590800-38597200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:38590800-38602800 Strong transcription Spleen Spleen
39 chr19:38590800-38603600 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr19:38590800-38603800 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr19:38590800-38606600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr19:38590800-38608800 Strong transcription Fetal Intestine Small intestine
43 chr19:38591000-38593800 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr19:38591000-38595200 Strong transcription Fetal Muscle Leg muscle
45 chr19:38591000-38596200 Weak transcription Primary hematopoietic stem cells blood
46 chr19:38591000-38596200 Weak transcription Hela-S3 cervix
47 chr19:38591000-38601800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr19:38591000-38605000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr19:38591200-38594000 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr19:38591200-38596200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015