Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10204667	0.80[ASN][1000 genomes]
rs12692042	0.83[CHB][hapmap];0.80[ASN][1000 genomes]
rs12692049	0.87[CHB][hapmap];0.80[ASN][1000 genomes]
rs12996989	0.84[CHB][hapmap]
rs12999447	0.84[CHB][hapmap]
rs13001299	0.89[CHB][hapmap]
rs13004107	0.83[CHB][hapmap]
rs13009775	0.83[CHB][hapmap];0.80[ASN][1000 genomes]
rs13021878	0.84[CHB][hapmap]
rs13022878	0.80[ASN][1000 genomes]
rs13028524	0.80[ASN][1000 genomes]
rs13028948	0.80[ASN][1000 genomes]
rs13031109	0.80[ASN][1000 genomes]
rs1401122	0.81[ASN][1000 genomes]
rs1401123	0.81[ASN][1000 genomes]
rs1486967	0.83[CHB][hapmap]
rs17385521	0.88[CHB][hapmap];0.99[ASN][1000 genomes]
rs17477145	0.84[CHB][hapmap]
rs1968911	0.81[ASN][1000 genomes]
rs2046563	0.82[CHB][hapmap]
rs2046565	0.88[CHB][hapmap]
rs35699793	0.81[ASN][1000 genomes]
rs35871598	0.81[ASN][1000 genomes]
rs35958180	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs682371	0.81[EUR][1000 genomes]
rs7567599	0.84[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834392	chr2:140920900-141086613	Flanking Active TSS Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv431757	chr2:140931289-141098020	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	esv2754491	chr2:140947477-141026986	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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