Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10212395	0.92[EUR][1000 genomes]
rs10780020	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10865851	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1109973	0.82[AFR][1000 genomes]
rs11924534	0.90[ASN][1000 genomes]
rs12486443	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4234230	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4377444	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4411835	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4525815	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4530479	0.92[EUR][1000 genomes]
rs4550783	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4599247	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6550241	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6782895	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9817642	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9845173	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9866710	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9868204	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9871398	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9875057	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522881	chr3:33736126-34241686	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:33998400-34008400	Weak transcription	K562	blood

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