Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12496631	0.85[EUR][1000 genomes]
rs13074417	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13088306	0.80[EUR][1000 genomes]
rs13097914	0.92[EUR][1000 genomes]
rs1347611	0.85[EUR][1000 genomes]
rs1370032	0.85[EUR][1000 genomes]
rs34506181	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4859048	0.83[EUR][1000 genomes]
rs4859060	0.85[EUR][1000 genomes]
rs6419886	0.85[EUR][1000 genomes]
rs6419887	0.85[EUR][1000 genomes]
rs6419888	0.85[EUR][1000 genomes]
rs6551477	0.85[EUR][1000 genomes]
rs6774777	0.84[EUR][1000 genomes]
rs6781697	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs67915858	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6791881	0.85[EUR][1000 genomes]
rs6794181	0.84[EUR][1000 genomes]
rs6803815	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7430324	0.81[EUR][1000 genomes]
rs7433355	0.81[EUR][1000 genomes]
rs7623702	0.85[EUR][1000 genomes]
rs7635070	0.85[EUR][1000 genomes]
rs7642134	0.81[EUR][1000 genomes]
rs7644095	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9713450	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9864034	0.81[EUR][1000 genomes]
rs9868316	0.81[EUR][1000 genomes]
rs9869786	0.83[EUR][1000 genomes]
rs9871001	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9881446	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877116	chr3:86518318-86964922	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv519148	chr3:86831077-86995124	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv877129	chr3:86845934-86964922	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86963200-86964600	Enhancers	HSMMtube	muscle
2	chr3:86963600-86964600	Enhancers	Fetal Muscle Leg	muscle
3	chr3:86963800-86964600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:86964000-86964400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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