Variant report

Variant	rs13102814
Chromosome Location	chr4:125666014-125666015
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10518443	0.82[EUR][1000 genomes]
rs13109378	0.85[EUR][1000 genomes]
rs13111027	0.85[EUR][1000 genomes]
rs13113484	0.83[EUR][1000 genomes]
rs13134434	0.81[EUR][1000 genomes]
rs13141870	0.82[EUR][1000 genomes]
rs13146997	0.82[EUR][1000 genomes]
rs34078885	0.83[EUR][1000 genomes]
rs34614769	0.82[EUR][1000 genomes]
rs58661679	0.85[EUR][1000 genomes]
rs61231754	0.85[EUR][1000 genomes]
rs66521462	0.85[EUR][1000 genomes]
rs6827142	0.82[EUR][1000 genomes]
rs6840646	0.85[EUR][1000 genomes]
rs6841569	1.00[TSI][hapmap];0.85[EUR][1000 genomes]
rs71610103	0.80[EUR][1000 genomes]
rs72916638	0.82[EUR][1000 genomes]
rs72916676	0.80[EUR][1000 genomes]
rs73848114	0.85[EUR][1000 genomes]
rs7677014	0.82[EUR][1000 genomes]
rs7677514	0.82[EUR][1000 genomes]
rs963914	0.82[EUR][1000 genomes]
rs963915	0.82[EUR][1000 genomes]
rs963916	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125666000-125666200	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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