Variant report

Variant	rs6841569
Chromosome Location	chr4:125666719-125666720
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:125631232..125634109-chr4:125665625..125667301,2	K562	blood:

Variant related genes	Relation type
ENSG00000151458	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10031582	0.87[ASN][1000 genomes]
rs10518443	0.97[EUR][1000 genomes]
rs11943658	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13102814	1.00[TSI][hapmap];0.85[EUR][1000 genomes]
rs13109378	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13111027	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13113484	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13119552	0.84[ASN][1000 genomes]
rs13124340	0.84[ASN][1000 genomes]
rs13133825	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13134434	0.95[EUR][1000 genomes]
rs13137556	0.84[ASN][1000 genomes]
rs13141870	0.97[EUR][1000 genomes]
rs13146997	0.97[EUR][1000 genomes]
rs17008674	0.84[ASN][1000 genomes]
rs2036203	0.86[ASN][1000 genomes]
rs2055273	0.89[ASN][1000 genomes]
rs28427235	0.89[ASN][1000 genomes]
rs313997	0.89[ASN][1000 genomes]
rs34078885	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34614769	0.97[EUR][1000 genomes]
rs34813358	0.84[ASN][1000 genomes]
rs35452496	0.84[ASN][1000 genomes]
rs35728397	0.84[ASN][1000 genomes]
rs36040717	0.84[ASN][1000 genomes]
rs55741225	0.84[ASN][1000 genomes]
rs56138521	0.84[ASN][1000 genomes]
rs57205016	0.84[ASN][1000 genomes]
rs58445385	0.84[ASN][1000 genomes]
rs58661679	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61231754	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66521462	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6827142	0.97[EUR][1000 genomes]
rs6830179	0.89[ASN][1000 genomes]
rs6840646	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs71610103	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72916638	0.97[EUR][1000 genomes]
rs72916676	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73848114	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7672230	0.84[ASN][1000 genomes]
rs7677014	0.97[EUR][1000 genomes]
rs7677514	0.97[EUR][1000 genomes]
rs963914	0.97[EUR][1000 genomes]
rs963915	0.97[EUR][1000 genomes]
rs963916	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125666200-125667200	Weak transcription	Fetal Heart	heart
2	chr4:125666600-125667000	Enhancers	Ovary	ovary

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