Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:174942944..174945521-chr4:174947368..174948957,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10002337	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10004896	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10007379	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10028766	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10520266	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11735098	0.80[EUR][1000 genomes]
rs13110635	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13111991	0.81[EUR][1000 genomes]
rs13113162	0.91[EUR][1000 genomes]
rs2217853	0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2332799	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4235203	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4331759	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4362799	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4495020	0.82[EUR][1000 genomes]
rs4524361	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4524362	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4593104	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62336626	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs62336628	0.91[ASN][1000 genomes]
rs6815740	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7664899	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830155	chr4:174943809-175136483	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174944600-174945000	Enhancers	Hela-S3	cervix
2	chr4:174944600-174945400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:174944800-174945400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

Quick Search: