Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10002337	0.84[EUR][1000 genomes]
rs10004896	0.84[EUR][1000 genomes]
rs10007379	0.84[EUR][1000 genomes]
rs10028766	0.88[EUR][1000 genomes]
rs10520266	0.82[EUR][1000 genomes]
rs11724216	0.83[ASN][1000 genomes]
rs11735098	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12651065	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13110635	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13110863	0.82[EUR][1000 genomes]
rs13111991	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13113162	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13119610	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2332799	0.85[EUR][1000 genomes]
rs4235203	0.84[EUR][1000 genomes]
rs4331759	0.86[AFR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4362799	0.83[EUR][1000 genomes]
rs4524361	0.83[EUR][1000 genomes]
rs4524362	0.95[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4593104	0.84[EUR][1000 genomes]
rs6815740	0.84[EUR][1000 genomes]
rs7664899	0.84[EUR][1000 genomes]
rs7674474	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830154	chr4:174781983-174940640	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174914800-174922400	Weak transcription	Rectal Smooth Muscle	rectum
2	chr4:174920000-174920800	Enhancers	K562	blood

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