Variant report
Variant | rs13113162 |
---|---|
Chromosome Location | chr4:174945257-174945258 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr4:174942944..174945521-chr4:174947368..174948957,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10002337 | 0.89[EUR][1000 genomes] |
rs10004896 | 0.89[EUR][1000 genomes] |
rs10007379 | 0.89[EUR][1000 genomes] |
rs10028766 | 0.81[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs10520266 | 0.91[EUR][1000 genomes] |
rs11133026 | 0.81[AMR][1000 genomes] |
rs11724216 | 0.88[AMR][1000 genomes];0.95[ASN][1000 genomes] |
rs11735098 | 0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs11938548 | 0.82[AMR][1000 genomes] |
rs12651065 | 0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs13110635 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs13110863 | 0.91[EUR][1000 genomes] |
rs13111991 | 0.82[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs13119610 | 0.83[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs13128730 | 0.84[AMR][1000 genomes] |
rs2332799 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs4235203 | 0.89[EUR][1000 genomes] |
rs4331759 | 0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4362799 | 0.88[EUR][1000 genomes] |
rs4495020 | 0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4524361 | 0.87[EUR][1000 genomes] |
rs4524362 | 0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4593104 | 0.89[EUR][1000 genomes] |
rs6815740 | 0.89[EUR][1000 genomes] |
rs7664899 | 0.89[EUR][1000 genomes] |
rs7674474 | 0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7695081 | 0.82[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv830155 | chr4:174943809-175136483 | Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:174944600-174945400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
2 | chr4:174944800-174945400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |