Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11099727	0.85[ASN][1000 genomes]
rs1157188	0.82[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs12374208	0.83[ASN][1000 genomes]
rs12374271	0.83[ASN][1000 genomes]
rs13141632	0.98[ASN][1000 genomes]
rs1319110	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17026127	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs17624426	0.85[ASN][1000 genomes]
rs17686333	0.85[ASN][1000 genomes]
rs56112611	0.83[ASN][1000 genomes]
rs59501220	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs67730534	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs71622754	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs725653	0.83[ASN][1000 genomes]
rs72721883	0.85[ASN][1000 genomes]
rs72721885	0.85[ASN][1000 genomes]
rs72721895	0.85[ASN][1000 genomes]
rs72724014	0.86[ASN][1000 genomes]
rs72724016	0.88[ASN][1000 genomes]
rs72724017	0.87[ASN][1000 genomes]
rs72724018	0.88[ASN][1000 genomes]
rs72724021	0.88[ASN][1000 genomes]
rs72724022	0.88[ASN][1000 genomes]
rs72724023	0.88[ASN][1000 genomes]
rs72724025	0.87[ASN][1000 genomes]
rs72724036	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016977	chr4:150173255-150605595	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv537298	chr4:150173255-150605595	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1026797	chr4:150246932-151217137	Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:150291000-150291400	Enhancers	Sigmoid Colon	Sigmoid Colon
2	chr4:150291200-150293000	Enhancers	Liver	Liver

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