Variant report

Variant	rs1313924
Chromosome Location	chr4:103375303-103375304
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1037999	1.00[CHB][hapmap]
rs1313925	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1314336	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.89[MKK][hapmap]
rs1811810	1.00[CHB][hapmap];0.87[MEX][hapmap]
rs2045797	0.95[CHB][hapmap]
rs230490	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6533015	1.00[CHB][hapmap]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs1313924	EIF4E	cis	parietal	SCAN
rs1313924	SLC39A8	cis	parietal	SCAN
rs1313924	ADH1A	cis	parietal	SCAN
rs1313924	DDIT4L	cis	cerebellum	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103372400-103376000	Weak transcription	Fetal Lung	lung
2	chr4:103374400-103376400	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr4:103374800-103375400	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr4:103375000-103375400	Enhancers	Fetal Muscle Trunk	muscle
5	chr4:103375000-103376000	Enhancers	Primary B cells from peripheral blood	blood
6	chr4:103375000-103376000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr4:103375000-103376200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr4:103375200-103375800	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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