Variant report

Variant	rs6533015
Chromosome Location	chr4:103355533-103355534
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1037999	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap]
rs1313924	1.00[CHB][hapmap]
rs1313925	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[TSI][hapmap]
rs1314336	1.00[CHB][hapmap]
rs1811810	1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap]
rs2045797	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.92[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.89[MKK][hapmap];0.95[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2045798	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2169597	1.00[CEU][hapmap]
rs230490	0.96[CEU][hapmap];1.00[CHB][hapmap]
rs2903280	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4699026	0.81[GIH][hapmap]
rs6533013	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6533014	0.88[GIH][hapmap];0.80[JPT][hapmap];0.82[ASN][1000 genomes]
rs964503	0.80[JPT][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103352400-103363000	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr4:103352600-103359000	Weak transcription	Hela-S3	cervix
3	chr4:103352800-103360000	Weak transcription	Brain Cingulate Gyrus	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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