Variant report

Variant rs13184447
Chromosome Location chr5:178370643-178370644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178353800-178374800 ZNF genes & repeats Liver Liver
2 chr5:178366400-178372600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:178367000-178374600 ZNF genes & repeats Spleen Spleen
4 chr5:178368800-178377000 Weak transcription Psoas Muscle Psoas
5 chr5:178369000-178371000 Weak transcription Placenta Amnion Placenta Amnion
6 chr5:178369000-178371200 Weak transcription Brain Angular Gyrus brain
7 chr5:178369000-178371200 Weak transcription Fetal Kidney kidney
8 chr5:178369000-178371200 Weak transcription Left Ventricle heart
9 chr5:178369000-178372800 Weak transcription Brain Inferior Temporal Lobe brain
10 chr5:178369000-178373800 Weak transcription Brain Substantia Nigra brain
11 chr5:178369000-178374000 Weak transcription Osteobl bone
12 chr5:178369000-178374400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
13 chr5:178369000-178378400 Weak transcription NHDF-Ad bronchial
14 chr5:178369000-178378800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
15 chr5:178369000-178380200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr5:178369000-178384800 ZNF genes & repeats Fetal Stomach stomach
17 chr5:178369200-178371200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:178369200-178371200 Weak transcription Brain Cingulate Gyrus brain
19 chr5:178369200-178371800 Weak transcription Fetal Heart heart
20 chr5:178369200-178372200 Weak transcription Right Ventricle heart
21 chr5:178369200-178373000 Weak transcription Colon Smooth Muscle Colon
22 chr5:178369400-178374800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
23 chr5:178369400-178418200 ZNF genes & repeats Fetal Brain Female brain
24 chr5:178369600-178370800 ZNF genes & repeats Brain Hippocampus Middle brain
25 chr5:178369600-178372200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr5:178369600-178373200 ZNF genes & repeats Fetal Lung lung
27 chr5:178369600-178373600 ZNF genes & repeats Brain Germinal Matrix brain
28 chr5:178369600-178374400 Strong transcription Stomach Smooth Muscle stomach
29 chr5:178369600-178377400 Strong transcription Fetal Muscle Trunk muscle
30 chr5:178369800-178373600 Weak transcription Rectal Smooth Muscle rectum
31 chr5:178370000-178376200 Weak transcription Placenta Placenta
32 chr5:178370000-178378400 Weak transcription Muscle Satellite Cultured Cells --
33 chr5:178370200-178371000 ZNF genes & repeats Ovary ovary
34 chr5:178370200-178374200 Strong transcription Brain Anterior Caudate brain
35 chr5:178370400-178371400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:178370400-178372400 Strong transcription Pancreas Pancrea
37 chr5:178370600-178371000 Weak transcription Fetal Muscle Leg muscle
38 chr5:178370600-178371400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr5:178370600-178371600 Weak transcription Fetal Brain Male brain
40 chr5:178370600-178371800 Weak transcription Fetal Intestine Large intestine

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