Variant report

Variant	rs13197334
Chromosome Location	chr6:26122648-26122649
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:93)
CpG islands
(count:0)
Chromatin interactive
region (count:24)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:93 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFIC	chr6:26122615-26125565	GM12878	blood:	n/a	n/a
2	MXI1	chr6:26122292-26127660	SK-N-SH	brain:	n/a	n/a
3	TCF12	chr6:26122459-26125586	A549	lung:	n/a	chr6:26125022-26125029
4	MXI1	chr6:26122475-26123746	GM12878	blood:	n/a	n/a
5	MAX	chr6:26122598-26125340	A549	lung:	n/a	n/a
6	POLR2A	chr6:26122292-26127005	HepG2	liver:	n/a	n/a
7	POLR2A	chr6:26122637-26126581	HepG2	liver:	n/a	n/a
8	ZBTB33	chr6:26122565-26124856	SK-N-SH	brain:	n/a	chr6:26124412-26124427
9	POLR2A	chr6:26122490-26127190	SK-N-SH	brain:	n/a	n/a
10	KAP1	chr6:26122554-26123170	K562	blood:	n/a	n/a
11	TEAD4	chr6:26122575-26123838	ECC-1	luminal epithelium:	n/a	n/a
12	ZEB1	chr6:26122608-26125172	HepG2	liver:	n/a	n/a
13	POLR2A	chr6:26122233-26126588	ECC-1	luminal epithelium:	n/a	n/a
14	POLR2A	chr6:26122645-26126677	MCF10A-Er-Src	breast:	n/a	n/a
15	CTCF	chr6:26122620-26122770	HMF	breast:	n/a	n/a
16	STAT3	chr6:26122574-26122832	MCF10A-Er-Src	breast:	n/a	n/a
17	POLR2A	chr6:26122407-26127601	SK-N-MC	brain:	n/a	n/a
18	TCF12	chr6:26122635-26124873	ECC-1	luminal epithelium:	n/a	n/a
19	PML	chr6:26122206-26129108	K562	blood:	n/a	n/a
20	POLR2A	chr6:26122631-26127062	PFSK-1	brain:	n/a	n/a
21	CREB1	chr6:26122612-26125234	HepG2	liver:	n/a	n/a
22	POLR2A	chr6:26122640-26125897	K562	blood:	n/a	n/a
23	TAF1	chr6:26122636-26124829	K562	blood:	n/a	n/a
24	POLR2A	chr6:26112014-26135800	K562	blood:	n/a	n/a
25	SIN3AK20	chr6:26122600-26127033	MCF-7	breast:	n/a	n/a
26	MXI1	chr6:26122312-26124617	K562	blood:	n/a	n/a
27	POLR2A	chr6:26122630-26125525	K562	blood:	n/a	n/a
28	TBL1XR1	chr6:26122350-26123618	K562	blood:	n/a	n/a
29	MYBL2	chr6:26120835-26125191	HepG2	liver:	n/a	n/a
30	POLR2A	chr6:26122613-26126646	GM12892	blood:	n/a	n/a
31	POLR2A	chr6:26122626-26127189	Hela-S3	cervix:	n/a	n/a
32	MAX	chr6:26122633-26123676	SK-N-SH	brain:	n/a	n/a
33	ATF2	chr6:26122582-26127052	H1-hESC	embryonic stem cell:	n/a	n/a
34	TEAD4	chr6:26122259-26125080	K562	blood:	n/a	n/a
35	CEBPB	chr6:26122630-26123838	K562	blood:	n/a	chr6:26122790-26122802
36	ATF2	chr6:26122590-26125042	H1-hESC	embryonic stem cell:	n/a	n/a
37	TEAD4	chr6:26120905-26127941	K562	blood:	n/a	n/a
38	POLR2A	chr6:26122504-26125149	K562	blood:	n/a	n/a
39	BCLAF1	chr6:26122252-26127868	K562	blood:	n/a	chr6:26126779-26126788 chr6:26122722-26122731 chr6:26125896-26125905
40	ZBTB33	chr6:26122629-26125726	SK-N-SH	brain:	n/a	chr6:26124412-26124427 chr6:26125346-26125355
41	POLR2A	chr6:26122527-26127005	K562	blood:	n/a	n/a
42	POLR2A	chr6:26120221-26136970	K562	blood:	n/a	n/a
43	MTA3	chr6:26122506-26126009	GM12878	blood:	n/a	n/a
44	NFIC	chr6:26120879-26124973	HepG2	liver:	n/a	n/a
45	HEY1	chr6:26122251-26126847	HepG2	liver:	n/a	n/a
46	POLR2A	chr6:26122230-26127184	MCF-7	breast:	n/a	n/a
47	TAF1	chr6:26122645-26125089	H1-hESC	embryonic stem cell:	n/a	n/a
48	CBX3	chr6:26122602-26124928	K562	blood:	n/a	n/a
49	CREB1	chr6:26122211-26125496	K562	blood:	n/a	n/a
50	POLR2A	chr6:26122549-26127097	H1-hESC	embryonic stem cell:	n/a	n/a

No data

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:26120892..26123580-chr6:27107524..27109236,2	K562	blood:
2	chr6:25726943..25728808-chr6:26121898..26123990,2	K562	blood:
3	chr6:26121475..26124291-chr6:27775665..27777300,3	MCF-7	breast:
4	chr6:26121366..26126112-chr6:27111465..27116295,14	K562	blood:
5	chr6:26121961..26124186-chr6:27858294..27861024,3	MCF-7	breast:
6	chr6:26120836..26126141-chr6:27110374..27116911,13	K562	blood:
7	chr6:26122193..26124669-chr6:27781205..27782892,3	MCF-7	breast:
8	chr6:26122455..26127911-chr6:27777953..27784057,9	MCF-7	breast:
9	chr17:57913398..57916959-chr6:26122368..26124244,3	MCF-7	breast:
10	chr12:120728750..120731151-chr6:26122408..26123932,2	MCF-7	breast:
11	chr14:92301896..92304866-chr6:26122642..26125225,2	MCF-7	breast:
12	chr6:26119257..26128074-chr6:27097161..27104707,27	K562	blood:
13	chr6:26122616..26125832-chr6:27791584..27793805,3	K562	blood:
14	chr6:26119863..26128842-chr6:27096583..27102911,26	K562	blood:
15	chr6:26122246..26124996-chr6:26519353..26522732,3	K562	blood:
16	chr6:26122096..26124580-chr6:27856723..27859571,3	K562	blood:
17	chr1:108742708..108745390-chr6:26122298..26125155,2	MCF-7	breast:
18	chr6:26017750..26036418-chr6:26116875..26130553,65	MCF-7	breast:
19	chr17:77768640..77771440-chr6:26122363..26124849,2	MCF-7	breast:
20	chr6:26053512..26063692-chr6:26116837..26127451,29	MCF-7	breast:
21	chr6:26121790..26128581-chr6:27110404..27116881,10	MCF-7	breast:
22	chr6:26121882..26125935-chr6:27097712..27102367,10	MCF-7	breast:
23	chr11:65273507..65275023-chr6:26121224..26123950,2	K562	blood:
24	chr16:68589688..68592396-chr6:26122014..26124256,2	MCF-7	breast:

No data

Variant related genes	Relation type
HIST1H2AC	TF binding region
ENSG00000196374	Chromatin interaction
ENSG00000141570	Chromatin interaction
ENSG00000182611	Chromatin interaction
ENSG00000124635	Chromatin interaction
ENSG00000197153	Chromatin interaction
ENSG00000196747	Chromatin interaction
ENSG00000202538	Chromatin interaction
ENSG00000233224	Chromatin interaction
ENSG00000187837	Chromatin interaction
ENSG00000137259	Chromatin interaction
ENSG00000124610	Chromatin interaction
ENSG00000196176	Chromatin interaction
ENSG00000197238	Chromatin interaction
ENSG00000146047	Chromatin interaction
ENSG00000062716	Chromatin interaction
ENSG00000184939	Chromatin interaction
ENSG00000199289	Chromatin interaction
ENSG00000165929	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000200795	Chromatin interaction
ENSG00000196787	Chromatin interaction
ENSG00000124529	Chromatin interaction
ENSG00000198366	Chromatin interaction
ENSG00000185130	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000265565	Chromatin interaction
ENSG00000085491	Chromatin interaction
ENSG00000124693	Chromatin interaction
ENSG00000228223	Chromatin interaction

Extended variants
information (count: 84 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs1045537	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10484433	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10484435	1.00[ASN][1000 genomes]
rs13191776	1.00[ASN][1000 genomes]
rs13192365	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13192713	1.00[ASN][1000 genomes]
rs13193424	1.00[ASN][1000 genomes]
rs13195692	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13196552	1.00[ASN][1000 genomes]
rs13200797	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13200888	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13201821	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13202371	1.00[ASN][1000 genomes]
rs13203673	1.00[ASN][1000 genomes]
rs13206443	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13206501	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13210399	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13212652	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13214280	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13216785	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13220395	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891235	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891261	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891264	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891315	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891334	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17586553	0.81[ASN][1000 genomes]
rs17586784	1.00[ASN][1000 genomes]
rs17587597	1.00[ASN][1000 genomes]
rs2051539	1.00[ASN][1000 genomes]
rs28360595	1.00[ASN][1000 genomes]
rs34027471	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34116162	1.00[ASN][1000 genomes]
rs34233736	1.00[ASN][1000 genomes]
rs34791189	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35069699	1.00[ASN][1000 genomes]
rs35116528	1.00[ASN][1000 genomes]
rs35249036	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35335639	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35367169	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35378061	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35402046	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35484309	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35528636	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35778245	1.00[ASN][1000 genomes]
rs35825164	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35902160	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36012762	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3734523	0.81[ASN][1000 genomes]
rs3734528	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3752417	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56195001	1.00[ASN][1000 genomes]
rs56294283	1.00[ASN][1000 genomes]
rs60512607	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66790453	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67296946	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67844427	0.81[ASN][1000 genomes]
rs68149500	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6931120	0.81[ASN][1000 genomes]
rs6940007	0.81[ASN][1000 genomes]
rs71557315	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs71557316	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72832596	1.00[ASN][1000 genomes]
rs72834617	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72834623	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7749414	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029920	chr6:25638507-26585842	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
2	nsv538162	chr6:25638507-26585842	Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
3	nsv1030351	chr6:25813178-26352046	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1189 gene(s)	inside rSNPs	diseases
4	nsv1023453	chr6:25853830-26528250	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1201 gene(s)	inside rSNPs	diseases
5	nsv1025237	chr6:25874326-26280867	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
6	nsv538163	chr6:25874326-26280867	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
7	nsv1028456	chr6:25984457-26174993	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	873 gene(s)	inside rSNPs	diseases
8	nsv538165	chr6:25984457-26174993	Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	873 gene(s)	inside rSNPs	diseases
9	nsv428137	chr6:25987413-26351920	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1181 gene(s)	inside rSNPs	diseases
10	nsv916992	chr6:25991630-26280921	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1159 gene(s)	inside rSNPs	diseases
11	nsv1028232	chr6:26005449-26319756	Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1171 gene(s)	inside rSNPs	diseases
12	nsv870314	chr6:26008435-26280807	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1151 gene(s)	inside rSNPs	diseases
13	nsv1023457	chr6:26014014-26305407	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1170 gene(s)	inside rSNPs	diseases
14	nsv1025493	chr6:26026870-26223838	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1001 gene(s)	inside rSNPs	diseases
15	nsv1023979	chr6:26026870-26287399	Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1113 gene(s)	inside rSNPs	diseases
16	nsv1015782	chr6:26026870-26323895	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1114 gene(s)	inside rSNPs	diseases
17	nsv1018665	chr6:26026870-26352046	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1116 gene(s)	inside rSNPs	diseases
18	nsv482348	chr6:26082709-26261136	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	799 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs13197334	BTN3A2///BTN3A3	Cis_1M	lymphoblastoid	RTeQTL
rs13197334	BTN3A2	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26107600-26122800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:26119600-26123400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:26120800-26122800	Flanking Active TSS	HepG2	liver
4	chr6:26121600-26122800	Enhancers	HSMM	muscle
5	chr6:26121600-26123200	Flanking Active TSS	Liver	Liver
6	chr6:26121800-26122800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr6:26121800-26122800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr6:26121800-26122800	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr6:26121800-26125400	Active TSS	K562	blood
10	chr6:26122000-26122800	Enhancers	Primary hematopoietic stem cells	blood
11	chr6:26122000-26122800	Enhancers	Pancreas	Pancrea
12	chr6:26122000-26122800	Weak transcription	Small Intestine	intestine
13	chr6:26122400-26122800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr6:26122400-26122800	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr6:26122400-26122800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr6:26122400-26122800	Enhancers	Primary T helper naive cells from peripheral blood	blood
17	chr6:26122400-26122800	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr6:26122400-26122800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
19	chr6:26122400-26122800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr6:26122400-26122800	Enhancers	Stomach Mucosa	stomach
21	chr6:26122400-26122800	Enhancers	HUVEC	blood vessel
22	chr6:26122400-26122800	Enhancers	NHEK	skin
23	chr6:26122400-26123000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
24	chr6:26122400-26123000	Flanking Active TSS	A549	lung
25	chr6:26122400-26123000	Flanking Active TSS	HMEC	breast
26	chr6:26122400-26123200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
27	chr6:26122400-26123200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr6:26122400-26123200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
29	chr6:26122400-26123200	Flanking Active TSS	Dnd41	blood
30	chr6:26122400-26123200	Flanking Active TSS	Hela-S3	cervix
31	chr6:26122400-26123200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
32	chr6:26122400-26123400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr6:26122400-26123400	Flanking Active TSS	Fetal Thymus	thymus
34	chr6:26122400-26127800	Active TSS	ES-I3 Cell Line	embryonic stem cell
35	chr6:26122600-26122800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr6:26122600-26122800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr6:26122600-26122800	Active TSS	Primary monocytes fromperipheralblood	blood
38	chr6:26122600-26122800	Enhancers	Primary B cells from peripheral blood	blood
39	chr6:26122600-26122800	Enhancers	Primary T cells fromperipheralblood	blood
40	chr6:26122600-26122800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
41	chr6:26122600-26122800	Enhancers	Primary T helper cells PMA-I stimulated	--
42	chr6:26122600-26122800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr6:26122600-26122800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
44	chr6:26122600-26122800	Enhancers	Cortex derived primary cultured neurospheres	brain
45	chr6:26122600-26122800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr6:26122600-26122800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr6:26122600-26122800	Active TSS	Adipose Nuclei	Adipose
48	chr6:26122600-26122800	Enhancers	Brain Hippocampus Middle	brain
49	chr6:26122600-26122800	Flanking Active TSS	Duodenum Mucosa	Duodenum
50	chr6:26122600-26122800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links