Variant report

Variant rs16891235
Chromosome Location chr6:26017542-26017543
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26001600-26017600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:26001600-26020600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:26008800-26020600 Weak transcription Spleen Spleen
4 chr6:26016200-26017600 Active TSS Fetal Lung lung
5 chr6:26016200-26018400 Flanking Active TSS Fetal Muscle Leg muscle
6 chr6:26016200-26018600 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr6:26016200-26019800 Active TSS Fetal Kidney kidney
8 chr6:26016400-26017600 Active TSS Right Ventricle heart
9 chr6:26016400-26017800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr6:26016400-26017800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr6:26016400-26017800 Flanking Active TSS Fetal Intestine Small intestine
12 chr6:26016400-26018000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr6:26016400-26018000 Active TSS Left Ventricle heart
14 chr6:26016400-26018000 Active TSS Right Atrium heart
15 chr6:26016400-26018200 Active TSS iPS-18 Cell Line embryonic stem cell
16 chr6:26016400-26018200 Active TSS Ovary ovary
17 chr6:26016400-26018400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:26016400-26018600 Active TSS iPS-20b Cell Line embryonic stem cell
19 chr6:26016600-26017600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
20 chr6:26016600-26017600 Flanking Active TSS Placenta Amnion Placenta Amnion
21 chr6:26016600-26017800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
22 chr6:26016600-26017800 Flanking Active TSS NHEK skin
23 chr6:26016600-26017800 Flanking Active TSS Osteobl bone
24 chr6:26016600-26018000 Active TSS Fetal Heart heart
25 chr6:26016600-26018000 Flanking Active TSS HUVEC blood vessel
26 chr6:26016600-26018200 Active TSS HUES48 Cell Line embryonic stem cell
27 chr6:26016600-26018200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr6:26016600-26018200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr6:26016600-26018200 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
30 chr6:26016600-26018200 Flanking Active TSS HMEC breast
31 chr6:26016600-26018200 Active TSS NHDF-Ad bronchial
32 chr6:26016600-26018400 Active TSS iPS-15b Cell Line embryonic stem cell
33 chr6:26016600-26018400 Active TSS Aorta Aorta
34 chr6:26016600-26018400 Active TSS Duodenum Smooth Muscle Duodenum
35 chr6:26016600-26018600 Active TSS H9 Cell Line embryonic stem cell
36 chr6:26016800-26017600 Weak transcription Pancreas Pancrea
37 chr6:26016800-26017600 Bivalent/Poised TSS Psoas Muscle Psoas
38 chr6:26016800-26017800 Active TSS ES-WA7 Cell Line embryonic stem cell
39 chr6:26016800-26017800 Active TSS H1 Cell Line embryonic stem cell
40 chr6:26016800-26017800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr6:26016800-26018000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:26016800-26018000 Active TSS HUES64 Cell Line embryonic stem cell
43 chr6:26016800-26018000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr6:26016800-26018200 Active TSS HUES6 Cell Line embryonic stem cell
45 chr6:26016800-26018200 Active TSS Esophagus oesophagus
46 chr6:26016800-26018400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr6:26016800-26018400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:26017000-26017600 ZNF genes & repeats Placenta Placenta
49 chr6:26017000-26017800 Flanking Active TSS Fetal Intestine Large intestine
50 chr6:26017000-26018000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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