Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:163801051..163802963-chr6:163805360..163807590,2	K562	blood:
2	chr6:163800485..163802168-chr6:163807944..163809587,2	K562	blood:

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11760168	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13202733	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13204052	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1336223	0.87[ASN][1000 genomes]
rs1336224	0.87[ASN][1000 genomes]
rs1336225	0.87[ASN][1000 genomes]
rs1414724	0.83[ASN][1000 genomes]
rs1591536	0.83[ASN][1000 genomes]
rs1737321	0.87[ASN][1000 genomes]
rs1737328	0.94[ASN][1000 genomes]
rs1764009	0.87[ASN][1000 genomes]
rs1764015	0.83[ASN][1000 genomes]
rs1764019	0.83[ASN][1000 genomes]
rs1764020	0.94[ASN][1000 genomes]
rs2064224	0.91[ASN][1000 genomes]
rs2064226	0.87[ASN][1000 genomes]
rs2064227	0.90[ASN][1000 genomes]
rs2064230	0.82[ASN][1000 genomes]
rs2784872	0.87[ASN][1000 genomes]
rs2784875	0.87[ASN][1000 genomes]
rs3857503	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4263561	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4709713	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4709714	0.84[ASN][1000 genomes]
rs6455897	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6908317	0.87[ASN][1000 genomes]
rs6921172	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6927805	0.87[ASN][1000 genomes]
rs6929436	0.85[ASN][1000 genomes]
rs718878	0.83[ASN][1000 genomes]
rs718879	0.83[ASN][1000 genomes]
rs9364687	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932127	chr6:163000261-163950870	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1022610	chr6:163591786-163814041	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv534621	chr6:163731741-163950870	Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv970668	chr6:163792636-163802489	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:163791000-163813000	Weak transcription	Right Atrium	heart
2	chr6:163798000-163802400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:163800800-163802400	Enhancers	HepG2	liver
4	chr6:163800800-163803600	Weak transcription	Spleen	Spleen
5	chr6:163801200-163802200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr6:163801400-163802200	Weak transcription	Brain Anterior Caudate	brain
7	chr6:163801400-163802400	Weak transcription	Fetal Muscle Leg	muscle

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