Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:15943539..15950749-chr6:16127377..16131631,11	K562	blood:
2	chr6:15946829..15950495-chr6:16128387..16130943,5	MCF-7	breast:
3	chr6:15917469..15919347-chr6:15945804..15947857,2	MCF-7	breast:
4	chr6:15943795..15948359-chr6:16128219..16131208,6	MCF-7	breast:
5	chr6:15942064..15944736-chr6:15945639..15949280,3	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11966220	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[EUR][1000 genomes]
rs13198241	0.94[ASN][1000 genomes]
rs13202586	0.85[ASN][1000 genomes]
rs13214084	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13220668	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs2096215	0.92[ASN][1000 genomes]
rs2105355	0.85[ASN][1000 genomes]
rs28860300	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34126499	1.00[EUR][1000 genomes]
rs34301608	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34545176	1.00[EUR][1000 genomes]
rs35734382	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4712266	1.00[CEU][hapmap];0.81[CHB][hapmap]
rs707840	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs73724955	0.83[AFR][1000 genomes]
rs9349990	1.00[EUR][1000 genomes]
rs9358074	1.00[CEU][hapmap]
rs9370839	1.00[CEU][hapmap]
rs9370848	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9383091	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[EUR][1000 genomes]
rs9383093	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9383094	1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9396616	1.00[CEU][hapmap]
rs9396617	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15936400-15951200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:15944400-15951000	Weak transcription	Gastric	stomach
3	chr6:15945400-15947400	Enhancers	Placenta	Placenta
4	chr6:15945800-15947200	Enhancers	Psoas Muscle	Psoas
5	chr6:15945800-15948000	Enhancers	Fetal Muscle Leg	muscle
6	chr6:15946400-15949200	Weak transcription	NH-A	brain
7	chr6:15946400-15949400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:15946600-15949000	Weak transcription	K562	blood
9	chr6:15946600-15949200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr6:15946600-15949200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr6:15946600-15949200	Weak transcription	HUVEC	blood vessel
12	chr6:15946600-15949400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:15946800-15949400	Weak transcription	NHEK	skin

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