Variant report

Variant	rs4712266
Chromosome Location	chr6:15936290-15936291
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11966220	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[ASN][1000 genomes]
rs13208062	1.00[CEU][hapmap];0.81[CHB][hapmap]
rs13220668	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs2096212	0.98[ASN][1000 genomes]
rs34126499	0.91[ASN][1000 genomes]
rs34545176	0.91[ASN][1000 genomes]
rs707840	1.00[CEU][hapmap];0.87[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs9349990	0.98[ASN][1000 genomes]
rs9358074	1.00[CEU][hapmap]
rs9370839	1.00[CEU][hapmap];0.85[JPT][hapmap]
rs9383090	0.89[CHB][hapmap];0.85[JPT][hapmap];0.91[ASN][1000 genomes]
rs9383091	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[ASN][1000 genomes]
rs9383093	1.00[CEU][hapmap];0.81[CHB][hapmap]
rs9383094	0.81[CHB][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs9396616	1.00[CEU][hapmap];0.89[CHB][hapmap];0.91[ASN][1000 genomes]
rs9396617	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970079	chr6:15935054-15936602	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15928000-15936400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:15935000-15936800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:15936000-15937000	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:15936000-15937600	Enhancers	GM12878-XiMat	blood
5	chr6:15936000-15937800	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr6:15936000-15938200	Enhancers	Primary B cells from peripheral blood	blood
7	chr6:15936200-15937400	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr6:15936200-15937800	Enhancers	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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