Variant report

Variant	rs2096212
Chromosome Location	chr6:15927034-15927035
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:15921762..15925061-chr6:15925136..15927911,3	MCF-7	breast:
2	chr6:15918087..15920599-chr6:15926761..15928531,2	K562	blood:
3	chr6:15926509..15928201-chr6:15942706..15945656,2	K562	blood:
4	chr6:15898688..15901533-chr6:15925410..15927888,2	K562	blood:

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs10085230	0.86[EUR][1000 genomes]
rs10085361	0.81[CEU][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs1040469	0.81[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs11751544	0.86[EUR][1000 genomes]
rs11754210	0.91[EUR][1000 genomes]
rs11755611	0.88[EUR][1000 genomes]
rs11756689	0.83[EUR][1000 genomes]
rs11756991	0.91[EUR][1000 genomes]
rs11758001	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs11966220	1.00[CHB][hapmap];1.00[CHD][hapmap];0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs13208062	0.81[CHB][hapmap]
rs1539421	0.81[CEU][hapmap]
rs16877310	0.81[CEU][hapmap];0.91[EUR][1000 genomes]
rs16877316	0.81[CEU][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]
rs16877348	0.81[CEU][hapmap];0.83[TSI][hapmap];0.91[EUR][1000 genomes]
rs28454020	0.80[EUR][1000 genomes]
rs34126499	0.93[ASN][1000 genomes]
rs34545176	0.93[ASN][1000 genomes]
rs4365933	0.81[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs4551166	0.83[EUR][1000 genomes]
rs4712266	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.98[ASN][1000 genomes]
rs4716011	0.84[CEU][hapmap]
rs56306564	0.91[EUR][1000 genomes]
rs57309153	0.91[EUR][1000 genomes]
rs57383866	0.91[EUR][1000 genomes]
rs57780024	0.83[EUR][1000 genomes]
rs57857965	0.83[EUR][1000 genomes]
rs58035103	0.91[EUR][1000 genomes]
rs58279883	0.83[EUR][1000 genomes]
rs58436507	0.89[EUR][1000 genomes]
rs58645956	0.83[EUR][1000 genomes]
rs58910903	0.89[EUR][1000 genomes]
rs59037030	0.89[EUR][1000 genomes]
rs61684483	0.86[EUR][1000 genomes]
rs66519836	0.86[EUR][1000 genomes]
rs66835686	0.91[EUR][1000 genomes]
rs67947458	0.80[EUR][1000 genomes]
rs707840	0.82[JPT][hapmap]
rs72825626	0.86[EUR][1000 genomes]
rs72825628	0.86[EUR][1000 genomes]
rs72825649	0.86[EUR][1000 genomes]
rs72825654	0.91[EUR][1000 genomes]
rs72825657	0.91[EUR][1000 genomes]
rs72825659	0.91[EUR][1000 genomes]
rs72825660	0.91[EUR][1000 genomes]
rs72825662	0.89[EUR][1000 genomes]
rs72825664	0.91[EUR][1000 genomes]
rs72825669	0.85[EUR][1000 genomes]
rs72825676	0.85[EUR][1000 genomes]
rs729821	0.83[TSI][hapmap]
rs73368559	0.80[EUR][1000 genomes]
rs760957	0.80[CEU][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs7752521	0.81[CEU][hapmap]
rs808363	0.81[CEU][hapmap];0.89[EUR][1000 genomes]
rs808365	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9349990	1.00[ASN][1000 genomes]
rs9367887	0.81[CEU][hapmap]
rs9370839	0.85[JPT][hapmap]
rs9370853	0.81[CEU][hapmap]
rs9383090	0.89[CHB][hapmap];0.85[JPT][hapmap];0.93[ASN][1000 genomes]
rs9383091	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[JPT][hapmap];0.93[ASN][1000 genomes]
rs9383092	0.81[CEU][hapmap];0.83[TSI][hapmap];0.86[EUR][1000 genomes]
rs9383093	0.81[CHB][hapmap]
rs9383094	0.81[CHB][hapmap]
rs9396616	0.89[CHB][hapmap];0.93[ASN][1000 genomes]
rs9396617	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9396619	0.81[CEU][hapmap]
rs9464841	0.90[CEU][hapmap];0.86[EUR][1000 genomes]
rs9476970	0.81[CEU][hapmap]
rs9476971	0.81[CEU][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs9476972	0.86[EUR][1000 genomes]
rs9476973	0.86[EUR][1000 genomes]
rs9476976	0.81[CEU][hapmap];0.86[EUR][1000 genomes]
rs9476977	0.86[EUR][1000 genomes]
rs9476980	0.81[CEU][hapmap];0.89[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15921600-15927600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:15921600-15929400	Weak transcription	Adipose Nuclei	Adipose
3	chr6:15926000-15931000	Weak transcription	Aorta	Aorta
4	chr6:15926400-15927200	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr6:15926400-15927200	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr6:15926400-15928000	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr6:15926600-15927200	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr6:15926600-15927400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr6:15926600-15927800	Enhancers	Psoas Muscle	Psoas
10	chr6:15926600-15928200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr6:15926600-15929400	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr6:15926600-15930000	Enhancers	Placenta	Placenta
13	chr6:15927000-15927400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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