Variant report

Variant	rs9383092
Chromosome Location	chr6:15936912-15936913
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:15904972..15907971-chr6:15936573..15939321,3	K562	blood:
2	chr6:15935209..15937879-chr6:15952425..15954848,2	K562	blood:
3	chr6:15936585..15939387-chr6:16128876..16132065,3	K562	blood:
4	chr6:15934763..15939387-chr6:16128277..16133205,7	K562	blood:
5	chr6:15936726..15941484-chr6:15942658..15946371,4	K562	blood:
6	chr6:15936505..15939264-chr6:16134732..16136454,2	K562	blood:

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10085230	0.93[EUR][1000 genomes]
rs10085361	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];0.93[EUR][1000 genomes]
rs1040469	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11751544	0.93[EUR][1000 genomes]
rs11754210	0.95[EUR][1000 genomes]
rs11755611	0.95[EUR][1000 genomes]
rs11755677	0.84[EUR][1000 genomes]
rs11755935	0.82[EUR][1000 genomes]
rs11756689	0.90[EUR][1000 genomes]
rs11756991	0.95[EUR][1000 genomes]
rs11757470	0.80[EUR][1000 genomes]
rs11758001	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs1539421	1.00[CEU][hapmap];0.88[TSI][hapmap];0.84[EUR][1000 genomes]
rs16877310	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs16877316	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];0.95[EUR][1000 genomes]
rs16877348	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs2096212	0.86[EUR][1000 genomes]
rs28454020	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2876400	0.81[CEU][hapmap]
rs4365933	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4551166	0.90[EUR][1000 genomes]
rs56306564	0.95[EUR][1000 genomes]
rs57309153	0.95[EUR][1000 genomes]
rs57383866	0.95[EUR][1000 genomes]
rs57780024	0.90[EUR][1000 genomes]
rs57857965	0.90[EUR][1000 genomes]
rs58035103	0.95[EUR][1000 genomes]
rs58279883	0.90[EUR][1000 genomes]
rs58436507	0.97[EUR][1000 genomes]
rs58645956	0.94[EUR][1000 genomes]
rs58910903	0.93[EUR][1000 genomes]
rs59037030	0.97[EUR][1000 genomes]
rs61684483	0.94[EUR][1000 genomes]
rs66519836	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs66835686	0.95[EUR][1000 genomes]
rs67947458	0.87[EUR][1000 genomes]
rs72825626	0.93[EUR][1000 genomes]
rs72825628	0.93[EUR][1000 genomes]
rs72825649	0.93[EUR][1000 genomes]
rs72825654	0.95[EUR][1000 genomes]
rs72825657	0.95[EUR][1000 genomes]
rs72825659	0.95[EUR][1000 genomes]
rs72825660	0.95[EUR][1000 genomes]
rs72825662	0.97[EUR][1000 genomes]
rs72825664	0.95[EUR][1000 genomes]
rs72825669	0.95[EUR][1000 genomes]
rs72825676	0.95[EUR][1000 genomes]
rs72825695	0.84[EUR][1000 genomes]
rs72825697	0.84[EUR][1000 genomes]
rs72829622	0.84[EUR][1000 genomes]
rs729821	0.89[CEU][hapmap]
rs733409	0.89[CEU][hapmap]
rs73368559	0.87[EUR][1000 genomes]
rs742385	0.81[CEU][hapmap]
rs760957	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];0.93[EUR][1000 genomes]
rs7752521	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs808363	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs808365	0.89[EUR][1000 genomes]
rs9396619	1.00[CEU][hapmap]
rs9464841	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs9476970	1.00[CEU][hapmap]
rs9476971	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[TSI][hapmap];0.93[EUR][1000 genomes]
rs9476972	0.93[EUR][1000 genomes]
rs9476973	0.93[EUR][1000 genomes]
rs9476976	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs9476977	0.93[EUR][1000 genomes]
rs9476980	1.00[CEU][hapmap];0.97[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15936000-15937000	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr6:15936000-15937600	Enhancers	GM12878-XiMat	blood
3	chr6:15936000-15937800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr6:15936000-15938200	Enhancers	Primary B cells from peripheral blood	blood
5	chr6:15936200-15937400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr6:15936200-15937800	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr6:15936400-15937400	Enhancers	Primary B cells from cord blood	blood
8	chr6:15936400-15937600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:15936400-15937600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr6:15936400-15951200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr6:15936600-15937800	Enhancers	Primary hematopoietic stem cells	blood
12	chr6:15936800-15937000	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr6:15936800-15937200	Enhancers	K562	blood

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