Variant report

Variant	rs13216211
Chromosome Location	chr6:37355265-37355266
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37354319..37358453-chr6:37358678..37362908,5	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11964425	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs195429	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs195434	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs195443	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2269053	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35409514	0.90[EUR][1000 genomes]
rs369329	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62406475	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9470571	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37323400-37356800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:37324000-37366800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr6:37328000-37360800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr6:37328000-37361800	Strong transcription	Dnd41	blood
5	chr6:37328600-37361200	Strong transcription	Primary T cells fromperipheralblood	blood
6	chr6:37334400-37363200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:37337400-37357000	Weak transcription	Stomach Mucosa	stomach
8	chr6:37337400-37362600	Weak transcription	Psoas Muscle	Psoas
9	chr6:37337600-37361000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr6:37337600-37363200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr6:37337600-37363200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr6:37339200-37358400	Weak transcription	Small Intestine	intestine
13	chr6:37339200-37361000	Weak transcription	Fetal Brain Male	brain
14	chr6:37339600-37358600	Weak transcription	Gastric	stomach
15	chr6:37339800-37358200	Weak transcription	Pancreas	Pancrea
16	chr6:37339800-37361400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr6:37340400-37358800	Weak transcription	Fetal Kidney	kidney
18	chr6:37341400-37359400	Strong transcription	Fetal Muscle Trunk	muscle
19	chr6:37342400-37362000	Strong transcription	Adipose Nuclei	Adipose
20	chr6:37342600-37358200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr6:37343000-37363600	Strong transcription	Fetal Stomach	stomach
22	chr6:37343000-37365000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr6:37343400-37358200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr6:37343600-37355400	Strong transcription	Fetal Intestine Small	intestine
25	chr6:37344000-37357200	Weak transcription	Rectal Smooth Muscle	rectum
26	chr6:37344000-37361800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr6:37345600-37363400	Weak transcription	HUVEC	blood vessel
28	chr6:37346000-37362400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr6:37347600-37359200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr6:37347600-37359400	Strong transcription	GM12878-XiMat	blood
31	chr6:37347600-37359800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr6:37347600-37363000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr6:37347800-37359200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr6:37348400-37359200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr6:37349400-37358800	Weak transcription	NHDF-Ad	bronchial
36	chr6:37349800-37360400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr6:37349800-37363800	Weak transcription	Colon Smooth Muscle	Colon
38	chr6:37350000-37355600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr6:37350000-37356800	Weak transcription	Brain Cingulate Gyrus	brain
40	chr6:37350000-37368600	Weak transcription	Fetal Heart	heart
41	chr6:37350200-37355400	Weak transcription	NHLF	lung
42	chr6:37350200-37355600	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr6:37350200-37355800	Weak transcription	NH-A	brain
44	chr6:37350200-37356200	Weak transcription	Osteobl	bone
45	chr6:37350400-37356200	Weak transcription	Aorta	Aorta
46	chr6:37350400-37358200	Weak transcription	Primary neutrophils fromperipheralblood	blood
47	chr6:37350600-37356000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr6:37350800-37358400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr6:37351200-37357000	Weak transcription	A549	lung
50	chr6:37351400-37357000	Weak transcription	Brain Substantia Nigra	brain

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