Variant report

Variant	rs13271216
Chromosome Location	chr8:49717468-49717469
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49711422..49713759-chr8:49716191..49717743,2	MCF-7	breast:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10090157	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10092718	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10097910	0.81[ASN][1000 genomes]
rs10101066	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10108023	0.82[ASN][1000 genomes]
rs10111821	0.84[ASN][1000 genomes]
rs1126259	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11785748	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12155607	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12542203	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12547015	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12547603	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12547619	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12550270	0.89[ASN][1000 genomes]
rs2384970	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35243529	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4873084	0.81[EUR][1000 genomes]
rs4873285	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4873287	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4873288	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55923266	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6984858	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6990865	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9298058	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs966703	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49716000-49718000	Weak transcription	Fetal Muscle Leg	muscle
2	chr8:49716000-49718200	Weak transcription	Fetal Lung	lung
3	chr8:49716600-49718200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr8:49716800-49717600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:49716800-49718000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:49716800-49718400	Enhancers	HMEC	breast
7	chr8:49717200-49717600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr8:49717200-49718200	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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