The 2.0 version of rSNPBase

Variant report

Variant rs13336787
Chromosome Location chr16:72854120-72854121
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72822200-72866800 Weak transcription Brain Angular Gyrus brain
2 chr16:72822200-72869800 Weak transcription Primary B cells from peripheral blood blood
3 chr16:72822800-72855600 Weak transcription Thymus Thymus
4 chr16:72832200-72858400 Weak transcription Brain Hippocampus Middle brain
5 chr16:72832600-72874800 Weak transcription Spleen Spleen
6 chr16:72833600-72856000 Weak transcription Primary B cells from cord blood blood
7 chr16:72833600-72861000 Weak transcription Hela-S3 cervix
8 chr16:72833800-72861800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr16:72834200-72874200 Weak transcription Primary hematopoietic stem cells blood
10 chr16:72834800-72872200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr16:72835200-72860800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr16:72835200-72867400 Weak transcription NHEK skin
13 chr16:72845600-72855000 Weak transcription Fetal Lung lung
14 chr16:72845600-72858800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr16:72845600-72861400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr16:72845600-72861600 Weak transcription Fetal Kidney kidney
17 chr16:72845600-72869400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr16:72845600-72874400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr16:72845800-72862200 Weak transcription Colonic Mucosa Colon
20 chr16:72845800-72863200 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr16:72845800-72863200 Weak transcription Duodenum Mucosa Duodenum
22 chr16:72845800-72865200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr16:72845800-72867000 Weak transcription Ovary ovary
24 chr16:72846000-72858400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr16:72846000-72858800 Weak transcription Fetal Intestine Small intestine
26 chr16:72846000-72860800 Weak transcription Fetal Muscle Trunk muscle
27 chr16:72846000-72861400 Weak transcription Placenta Placenta
28 chr16:72846000-72861400 Weak transcription Left Ventricle heart
29 chr16:72846000-72861600 Weak transcription Gastric stomach
30 chr16:72846000-72863200 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr16:72846200-72856600 Weak transcription HUVEC blood vessel
32 chr16:72846200-72858800 Weak transcription A549 lung
33 chr16:72846600-72861400 Weak transcription Fetal Intestine Large intestine
34 chr16:72846600-72863800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr16:72846800-72860800 Weak transcription Adipose Nuclei Adipose
36 chr16:72847000-72861600 Weak transcription Primary monocytes fromperipheralblood blood
37 chr16:72847600-72858800 Weak transcription Liver Liver
38 chr16:72848400-72861400 Weak transcription Aorta Aorta
39 chr16:72848400-72861400 Weak transcription Pancreas Pancrea
40 chr16:72848400-72874200 Weak transcription Right Ventricle heart
41 chr16:72849800-72855800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr16:72850000-72861400 Weak transcription GM12878-XiMat blood
43 chr16:72851000-72854800 Enhancers Cortex derived primary cultured neurospheres brain
44 chr16:72851400-72854200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr16:72851600-72854600 Enhancers Stomach Smooth Muscle stomach
46 chr16:72851800-72861400 Weak transcription Right Atrium heart
47 chr16:72852000-72855200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr16:72852200-72854200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr16:72852200-72854400 Enhancers Osteobl bone
50 chr16:72852400-72855200 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015