Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10036664	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10040204	1.00[AMR][1000 genomes]
rs10043538	1.00[AMR][1000 genomes]
rs10043961	1.00[AMR][1000 genomes]
rs10052024	1.00[AMR][1000 genomes]
rs10052169	1.00[AMR][1000 genomes]
rs10054314	1.00[AMR][1000 genomes]
rs10073313	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10077242	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10476875	1.00[AMR][1000 genomes]
rs13356403	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13436791	1.00[AMR][1000 genomes]
rs13436850	1.00[AMR][1000 genomes]
rs2217647	1.00[AMR][1000 genomes]
rs28507009	1.00[AMR][1000 genomes]
rs34207413	1.00[EUR][1000 genomes]
rs4345360	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55695946	1.00[EUR][1000 genomes]
rs57017606	1.00[EUR][1000 genomes]
rs57301309	1.00[EUR][1000 genomes]
rs57342170	1.00[EUR][1000 genomes]
rs57791987	1.00[EUR][1000 genomes]
rs58878643	1.00[EUR][1000 genomes]
rs60380240	1.00[EUR][1000 genomes]
rs73302023	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73311522	1.00[EUR][1000 genomes]
rs73311531	1.00[EUR][1000 genomes]
rs73311568	1.00[EUR][1000 genomes]
rs73311570	1.00[EUR][1000 genomes]
rs73311572	1.00[EUR][1000 genomes]
rs868778	1.00[AMR][1000 genomes]
rs9285664	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883004	chr5:144945649-145068001	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv883005	chr5:144945649-145107586	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:144960200-144965200	Weak transcription	Duodenum Mucosa	Duodenum
2	chr5:144960200-144965200	Weak transcription	Fetal Intestine Large	intestine
3	chr5:144960200-144965200	Weak transcription	Fetal Intestine Small	intestine
4	chr5:144964200-144967400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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