Variant report

Variant	rs13361375
Chromosome Location	chr5:35239203-35239204
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10472951	0.85[EUR][1000 genomes]
rs10472952	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4703514	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7705676	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7710279	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7727306	0.88[EUR][1000 genomes]
rs7727503	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7728298	0.81[EUR][1000 genomes]
rs9292580	0.88[EUR][1000 genomes]
rs9292581	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9292582	0.88[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35230800-35246000	Weak transcription	Gastric	stomach
2	chr5:35230800-35247200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr5:35238200-35246200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:35238400-35241200	Weak transcription	Fetal Heart	heart
5	chr5:35238400-35246200	Weak transcription	Fetal Lung	lung
6	chr5:35238600-35240200	Weak transcription	HepG2	liver
7	chr5:35238600-35240400	Weak transcription	Fetal Intestine Large	intestine
8	chr5:35238600-35246400	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr5:35238800-35240200	Weak transcription	Stomach Mucosa	stomach
10	chr5:35238800-35240400	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr5:35238800-35242400	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr5:35239200-35240400	Weak transcription	Fetal Intestine Small	intestine
13	chr5:35239200-35241000	Enhancers	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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