Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:35228902..35231374-chr5:35237119..35239401,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000113494	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10053574	0.82[JPT][hapmap]
rs10472951	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10472952	0.85[CEU][hapmap];0.92[CHB][hapmap];0.92[YRI][hapmap];0.88[EUR][1000 genomes]
rs13154357	0.82[JPT][hapmap]
rs13354826	0.92[CHB][hapmap]
rs13361375	0.88[EUR][1000 genomes]
rs17317102	0.82[JPT][hapmap]
rs1864185	0.82[JPT][hapmap]
rs2047935	0.82[JPT][hapmap]
rs4703514	0.83[CEU][hapmap];0.92[CHB][hapmap];0.87[YRI][hapmap];0.88[EUR][1000 genomes]
rs6451195	0.82[JPT][hapmap]
rs6451196	0.82[JPT][hapmap]
rs6870392	0.82[JPT][hapmap]
rs6890966	0.82[JPT][hapmap]
rs7705676	0.85[CEU][hapmap];0.92[CHB][hapmap];0.92[YRI][hapmap];0.88[EUR][1000 genomes]
rs7710279	0.83[CEU][hapmap];0.92[CHB][hapmap];0.86[YRI][hapmap];0.88[EUR][1000 genomes]
rs7715575	0.82[JPT][hapmap]
rs7715855	0.82[JPT][hapmap]
rs7727306	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7727503	0.88[EUR][1000 genomes]
rs9292580	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9292581	0.85[CEU][hapmap];0.92[CHB][hapmap];0.92[YRI][hapmap];0.88[EUR][1000 genomes]
rs9986182	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35230800-35246000	Weak transcription	Gastric	stomach
2	chr5:35230800-35247200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr5:35235800-35239200	Weak transcription	Pancreas	Pancrea
4	chr5:35237000-35239200	Enhancers	Fetal Intestine Small	intestine
5	chr5:35238200-35246200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr5:35238400-35241200	Weak transcription	Fetal Heart	heart
7	chr5:35238400-35246200	Weak transcription	Fetal Lung	lung
8	chr5:35238600-35240200	Weak transcription	HepG2	liver
9	chr5:35238600-35240400	Weak transcription	Fetal Intestine Large	intestine
10	chr5:35238600-35246400	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr5:35238800-35240200	Weak transcription	Stomach Mucosa	stomach
12	chr5:35238800-35240400	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr5:35238800-35242400	Weak transcription	Rectal Mucosa Donor 31	rectum

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