The 2.0 version of rSNPBase

Variant report

Variant rs13395368
Chromosome Location chr2:171843230-171843231
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171830600-171902800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:171830800-171891400 Weak transcription Spleen Spleen
3 chr2:171831000-171847600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr2:171831000-171850000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr2:171831200-171845400 Weak transcription HMEC breast
6 chr2:171831200-171845800 Weak transcription Osteobl bone
7 chr2:171831200-171847000 Weak transcription A549 lung
8 chr2:171831200-171857400 Weak transcription HSMMtube muscle
9 chr2:171831400-171849400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:171831400-171857000 Weak transcription NHEK skin
11 chr2:171831400-171879200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:171831400-171916200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:171832000-171844800 Weak transcription GM12878-XiMat blood
14 chr2:171832600-171846000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr2:171832600-171852200 Weak transcription Fetal Intestine Small intestine
16 chr2:171833000-171848800 Weak transcription HepG2 liver
17 chr2:171835600-171843400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr2:171836600-171844800 Weak transcription Primary T cells from cord blood blood
19 chr2:171837600-171849200 Weak transcription H1 Cell Line embryonic stem cell
20 chr2:171838400-171849600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr2:171838600-171862000 Weak transcription Ovary ovary
22 chr2:171838800-171843800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:171838800-171845400 Weak transcription Stomach Smooth Muscle stomach
24 chr2:171838800-171847600 Weak transcription Duodenum Mucosa Duodenum
25 chr2:171838800-171861800 Weak transcription Colon Smooth Muscle Colon
26 chr2:171839000-171852400 Weak transcription NHLF lung
27 chr2:171839200-171843400 Weak transcription Placenta Placenta
28 chr2:171839200-171846600 Weak transcription Liver Liver
29 chr2:171839200-171847200 Weak transcription K562 blood
30 chr2:171839200-171854800 Weak transcription Pancreas Pancrea
31 chr2:171839400-171844600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:171839600-171844600 Weak transcription Fetal Muscle Leg muscle
33 chr2:171839800-171845600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr2:171840200-171845000 Weak transcription Primary B cells from cord blood blood
35 chr2:171840400-171843600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:171840400-171844600 Weak transcription Fetal Stomach stomach
37 chr2:171840400-171844800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:171840800-171845400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:171840800-171861800 Weak transcription Small Intestine intestine
40 chr2:171840800-171879200 Weak transcription Brain Hippocampus Middle brain
41 chr2:171841000-171844800 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr2:171841000-171845400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr2:171841000-171845400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr2:171841000-171845400 Weak transcription Primary B cells from peripheral blood blood
45 chr2:171841000-171847200 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr2:171841000-171848800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:171841000-171852400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr2:171841000-171862400 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:171841000-171865400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr2:171841000-171877800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015