Variant report
| Variant | rs2557800 |
|---|---|
| Chromosome Location | chr2:171839349-171839350 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:171830400-171842200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr2:171830600-171902800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr2:171830800-171839800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 4 | chr2:171830800-171891400 | Weak transcription | Spleen | Spleen |
| 5 | chr2:171831000-171840000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 6 | chr2:171831000-171847600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 7 | chr2:171831000-171850000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 8 | chr2:171831200-171840400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 9 | chr2:171831200-171843200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr2:171831200-171845400 | Weak transcription | HMEC | breast |
| 11 | chr2:171831200-171845800 | Weak transcription | Osteobl | bone |
| 12 | chr2:171831200-171847000 | Weak transcription | A549 | lung |
| 13 | chr2:171831200-171857400 | Weak transcription | HSMMtube | muscle |
| 14 | chr2:171831400-171849400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr2:171831400-171857000 | Weak transcription | NHEK | skin |
| 16 | chr2:171831400-171879200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr2:171831400-171916200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 18 | chr2:171831600-171840000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 19 | chr2:171832000-171844800 | Weak transcription | GM12878-XiMat | blood |
| 20 | chr2:171832600-171846000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 21 | chr2:171832600-171852200 | Weak transcription | Fetal Intestine Small | intestine |
| 22 | chr2:171833000-171848800 | Weak transcription | HepG2 | liver |
| 23 | chr2:171835600-171843400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 24 | chr2:171836600-171844800 | Weak transcription | Primary T cells from cord blood | blood |
| 25 | chr2:171837600-171849200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 26 | chr2:171838400-171839800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 27 | chr2:171838400-171839800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr2:171838400-171849600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 29 | chr2:171838600-171862000 | Weak transcription | Ovary | ovary |
| 30 | chr2:171838800-171843800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 31 | chr2:171838800-171845400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 32 | chr2:171838800-171847600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 33 | chr2:171838800-171861800 | Weak transcription | Colon Smooth Muscle | Colon |
| 34 | chr2:171839000-171852400 | Weak transcription | NHLF | lung |
| 35 | chr2:171839200-171840000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 36 | chr2:171839200-171840000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 37 | chr2:171839200-171843400 | Weak transcription | Placenta | Placenta |
| 38 | chr2:171839200-171846600 | Weak transcription | Liver | Liver |
| 39 | chr2:171839200-171847200 | Weak transcription | K562 | blood |
| 40 | chr2:171839200-171854800 | Weak transcription | Pancreas | Pancrea |
