The 2.0 version of rSNPBase

Variant report

Variant rs7560590
Chromosome Location chr2:171918496-171918497
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:171841600-171940000 Weak transcription Right Ventricle heart
2 chr2:171862800-171931200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr2:171878000-171943200 Weak transcription Small Intestine intestine
4 chr2:171878800-171940000 Weak transcription Stomach Mucosa stomach
5 chr2:171892400-171943400 Weak transcription Spleen Spleen
6 chr2:171898200-171928800 Weak transcription Fetal Stomach stomach
7 chr2:171898200-171946200 Weak transcription Pancreas Pancrea
8 chr2:171900000-171940000 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr2:171900200-171936400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:171900200-171937800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr2:171900400-171975400 Weak transcription Aorta Aorta
12 chr2:171902000-171924200 Weak transcription Fetal Intestine Small intestine
13 chr2:171903000-171940000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:171904000-171921000 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr2:171905600-171921200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:171905800-171939200 Weak transcription HSMMtube muscle
17 chr2:171907800-171942800 Weak transcription Colon Smooth Muscle Colon
18 chr2:171908200-171928400 Weak transcription Fetal Kidney kidney
19 chr2:171908200-171932200 Weak transcription Stomach Smooth Muscle stomach
20 chr2:171910200-171920600 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr2:171910600-171919600 Strong transcription GM12878-XiMat blood
22 chr2:171911600-171943200 Weak transcription NH-A brain
23 chr2:171912400-171937400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr2:171914200-171925800 Weak transcription HMEC breast
25 chr2:171915200-171918800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:171915800-171918600 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr2:171916400-171920400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr2:171916400-171932200 Weak transcription K562 blood
29 chr2:171916600-171924200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr2:171916600-171928000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr2:171916600-171930800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:171916600-171940000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr2:171916600-171944600 Weak transcription Lung lung
34 chr2:171916600-171950200 Weak transcription H9 Cell Line embryonic stem cell
35 chr2:171916600-171970800 Weak transcription Ovary ovary
36 chr2:171916800-171919000 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr2:171916800-171919200 Weak transcription Brain Hippocampus Middle brain
38 chr2:171916800-171921000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr2:171916800-171921800 Weak transcription Hela-S3 cervix
40 chr2:171916800-171925600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:171916800-171926000 Weak transcription A549 lung
42 chr2:171916800-171928800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr2:171916800-171935200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr2:171916800-171942200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr2:171916800-171943200 Weak transcription Muscle Satellite Cultured Cells --
46 chr2:171917000-171918600 Weak transcription Brain Anterior Caudate brain
47 chr2:171917000-171918800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:171917000-171920200 Weak transcription Primary hematopoietic stem cells blood
49 chr2:171917000-171920400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr2:171917000-171924200 Weak transcription Fetal Intestine Large intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015