The 2.0 version of rSNPBase

Variant report

Variant rs13398577
Chromosome Location chr2:37164968-37164969
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37120600-37168000 Weak transcription Thymus Thymus
2 chr2:37120800-37166400 Weak transcription Placenta Placenta
3 chr2:37132400-37192400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr2:37134600-37192400 Weak transcription Fetal Stomach stomach
5 chr2:37136400-37178800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:37142000-37178400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:37142000-37178800 Weak transcription Primary B cells from cord blood blood
8 chr2:37143400-37191000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr2:37143800-37191800 Weak transcription Primary monocytes fromperipheralblood blood
10 chr2:37150200-37191800 Weak transcription Fetal Thymus thymus
11 chr2:37152400-37177800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr2:37152400-37191800 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr2:37153800-37166800 Weak transcription Brain Substantia Nigra brain
14 chr2:37154000-37178400 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr2:37154200-37177600 Weak transcription Primary T cells from cord blood blood
16 chr2:37154200-37179400 Weak transcription Brain Anterior Caudate brain
17 chr2:37154600-37178800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr2:37154600-37179000 Weak transcription Esophagus oesophagus
19 chr2:37154600-37191800 Weak transcription Fetal Intestine Large intestine
20 chr2:37154800-37178200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:37154800-37178800 Weak transcription Primary T cells fromperipheralblood blood
22 chr2:37154800-37185600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:37155000-37183600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:37158000-37169200 Weak transcription Aorta Aorta
25 chr2:37158000-37175800 Weak transcription HepG2 liver
26 chr2:37158000-37183600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr2:37158200-37178800 Weak transcription Left Ventricle heart
28 chr2:37158200-37192000 Weak transcription Ovary ovary
29 chr2:37158400-37177200 Weak transcription Psoas Muscle Psoas
30 chr2:37158400-37178400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr2:37158600-37169000 Weak transcription K562 blood
32 chr2:37158600-37169400 Weak transcription A549 lung
33 chr2:37158600-37191800 Weak transcription Fetal Lung lung
34 chr2:37158800-37169400 Weak transcription NHDF-Ad bronchial
35 chr2:37159000-37178200 Weak transcription Muscle Satellite Cultured Cells --
36 chr2:37159000-37191800 Weak transcription Primary hematopoietic stem cells blood
37 chr2:37159200-37165000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:37159200-37166400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr2:37159200-37177200 Weak transcription HUVEC blood vessel
40 chr2:37159200-37178200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:37159200-37178200 Weak transcription NHEK skin
42 chr2:37161000-37168400 Weak transcription Fetal Heart heart
43 chr2:37163200-37172400 Weak transcription Fetal Muscle Trunk muscle
44 chr2:37163600-37178400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:37164200-37165600 Strong transcription Fetal Intestine Small intestine
46 chr2:37164600-37165200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr2:37164800-37165000 Enhancers Rectal Mucosa Donor 31 rectum
48 chr2:37164800-37168000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr2:37164800-37178800 Weak transcription Lung lung

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Last update: Aug 31, 2015