The 2.0 version of rSNPBase

Variant report

Variant rs13404356
Chromosome Location chr2:190624079-190624080
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190550800-190626800 Weak transcription Right Ventricle heart
2 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
3 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
4 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
5 chr2:190594800-190627000 Weak transcription Gastric stomach
6 chr2:190597800-190626600 Weak transcription Fetal Heart heart
7 chr2:190599000-190626800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr2:190601400-190626800 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:190602400-190626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:190603800-190626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:190605000-190626800 Weak transcription Fetal Brain Male brain
12 chr2:190607000-190626800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr2:190607000-190626800 Weak transcription NH-A brain
14 chr2:190607400-190626800 Weak transcription HSMMtube muscle
15 chr2:190608600-190626200 Weak transcription Muscle Satellite Cultured Cells --
16 chr2:190609600-190626600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr2:190609600-190627000 Weak transcription Small Intestine intestine
18 chr2:190609800-190626200 Weak transcription HMEC breast
19 chr2:190610000-190626800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr2:190610200-190627000 Weak transcription Lung lung
21 chr2:190610200-190627000 Weak transcription Spleen Spleen
22 chr2:190610400-190626200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr2:190610400-190626800 Weak transcription H9 Cell Line embryonic stem cell
24 chr2:190610400-190626800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr2:190610400-190627000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:190611200-190625800 Weak transcription NHEK skin
27 chr2:190611400-190626600 Weak transcription NHLF lung
28 chr2:190611800-190626000 Weak transcription HepG2 liver
29 chr2:190613200-190626200 Weak transcription A549 lung
30 chr2:190613200-190626800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr2:190613200-190626800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr2:190613200-190626800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr2:190613200-190626800 Weak transcription Brain Substantia Nigra brain
34 chr2:190613200-190626800 Weak transcription Colonic Mucosa Colon
35 chr2:190613200-190627000 Weak transcription Left Ventricle heart
36 chr2:190613600-190626600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr2:190613600-190626800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:190613600-190626800 Weak transcription Rectal Smooth Muscle rectum
39 chr2:190613800-190626000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:190614800-190626800 Weak transcription Brain Germinal Matrix brain
41 chr2:190615000-190626400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr2:190615000-190626800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr2:190617200-190626000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr2:190617200-190626800 Weak transcription Thymus Thymus
45 chr2:190617600-190625800 Weak transcription Fetal Brain Female brain
46 chr2:190617600-190626400 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr2:190617600-190626600 Weak transcription H1 Cell Line embryonic stem cell
48 chr2:190617600-190626800 Weak transcription Brain Angular Gyrus brain
49 chr2:190617600-190626800 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:190617800-190625800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015