The 2.0 version of rSNPBase

Variant report

Variant rs13418043
Chromosome Location chr2:190610231-190610232
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
3 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
4 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr2:190550800-190626800 Weak transcription Right Ventricle heart
6 chr2:190551200-190617000 Weak transcription HSMM muscle
7 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
8 chr2:190563600-190611800 Weak transcription Brain Substantia Nigra brain
9 chr2:190563600-190612600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:190568200-190611600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:190571600-190612400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr2:190573000-190611000 Weak transcription Stomach Smooth Muscle stomach
13 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
14 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
15 chr2:190577000-190611600 Weak transcription Ovary ovary
16 chr2:190577000-190622600 Weak transcription Aorta Aorta
17 chr2:190577200-190611800 Weak transcription Fetal Stomach stomach
18 chr2:190580000-190611000 Weak transcription Fetal Intestine Large intestine
19 chr2:190580000-190611600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
21 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
22 chr2:190589600-190611600 Weak transcription Fetal Intestine Small intestine
23 chr2:190590800-190614800 Weak transcription Esophagus oesophagus
24 chr2:190591000-190612800 Weak transcription Rectal Smooth Muscle rectum
25 chr2:190591200-190611200 Weak transcription Fetal Thymus thymus
26 chr2:190591800-190611800 Weak transcription Fetal Muscle Leg muscle
27 chr2:190593600-190611800 Weak transcription Left Ventricle heart
28 chr2:190594800-190627000 Weak transcription Gastric stomach
29 chr2:190596200-190612000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr2:190597800-190626600 Weak transcription Fetal Heart heart
31 chr2:190599000-190626800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr2:190600800-190616600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:190601400-190626800 Weak transcription Placenta Amnion Placenta Amnion
34 chr2:190602400-190611600 Weak transcription Osteobl bone
35 chr2:190602400-190617000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr2:190602400-190626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr2:190603200-190612000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr2:190603800-190626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr2:190604400-190611800 Weak transcription Thymus Thymus
40 chr2:190605000-190626800 Weak transcription Fetal Brain Male brain
41 chr2:190605400-190611800 Weak transcription GM12878-XiMat blood
42 chr2:190606400-190611600 Weak transcription Fetal Brain Female brain
43 chr2:190606400-190612600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr2:190606600-190613200 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr2:190606800-190611800 Weak transcription Brain Germinal Matrix brain
46 chr2:190606800-190613200 Strong transcription Primary B cells from cord blood blood
47 chr2:190607000-190619200 Weak transcription NHDF-Ad bronchial
48 chr2:190607000-190626800 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr2:190607000-190626800 Weak transcription NH-A brain
50 chr2:190607400-190611000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015