The 2.0 version of rSNPBase

Variant report

Variant rs13416709
Chromosome Location chr2:190615111-190615112
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
3 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:190550800-190626800 Weak transcription Right Ventricle heart
5 chr2:190551200-190617000 Weak transcription HSMM muscle
6 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
7 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
8 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
9 chr2:190577000-190622600 Weak transcription Aorta Aorta
10 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
11 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
12 chr2:190594800-190627000 Weak transcription Gastric stomach
13 chr2:190597800-190626600 Weak transcription Fetal Heart heart
14 chr2:190599000-190626800 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr2:190600800-190616600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:190601400-190626800 Weak transcription Placenta Amnion Placenta Amnion
17 chr2:190602400-190617000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:190602400-190626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr2:190603800-190626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr2:190605000-190626800 Weak transcription Fetal Brain Male brain
21 chr2:190607000-190619200 Weak transcription NHDF-Ad bronchial
22 chr2:190607000-190626800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr2:190607000-190626800 Weak transcription NH-A brain
24 chr2:190607400-190626800 Weak transcription HSMMtube muscle
25 chr2:190607800-190621000 Strong transcription Liver Liver
26 chr2:190607800-190622400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr2:190608400-190620200 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr2:190608600-190626200 Weak transcription Muscle Satellite Cultured Cells --
29 chr2:190609400-190617400 Weak transcription Brain Anterior Caudate brain
30 chr2:190609600-190626600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr2:190609600-190627000 Weak transcription Small Intestine intestine
32 chr2:190609800-190620400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:190609800-190626200 Weak transcription HMEC breast
34 chr2:190610000-190626800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr2:190610200-190616800 Weak transcription H1 Cell Line embryonic stem cell
36 chr2:190610200-190627000 Weak transcription Lung lung
37 chr2:190610200-190627000 Weak transcription Spleen Spleen
38 chr2:190610400-190626200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:190610400-190626800 Weak transcription H9 Cell Line embryonic stem cell
40 chr2:190610400-190626800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr2:190610400-190627000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:190610800-190617000 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr2:190610800-190617800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr2:190610800-190620200 Strong transcription Fetal Muscle Trunk muscle
45 chr2:190611200-190620200 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr2:190611200-190620200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr2:190611200-190625800 Weak transcription NHEK skin
48 chr2:190611400-190626600 Weak transcription NHLF lung
49 chr2:190611800-190616800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:190611800-190620200 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015