The 2.0 version of rSNPBase

Variant report

Variant rs73049960
Chromosome Location chr2:190529079-190529080
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190525600-190529800 Active TSS GM12878-XiMat blood
2 chr2:190527000-190534800 Weak transcription Lung lung
3 chr2:190527400-190529200 Enhancers Primary T helper cells fromperipheralblood blood
4 chr2:190527400-190529200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:190527400-190529600 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr2:190527400-190529800 Enhancers Liver Liver
7 chr2:190527400-190529800 Weak transcription Fetal Intestine Large intestine
8 chr2:190527400-190530200 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr2:190527400-190530800 Weak transcription H1 Cell Line embryonic stem cell
10 chr2:190527400-190530800 Weak transcription NHLF lung
11 chr2:190527400-190531200 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:190527400-190531600 Weak transcription H9 Cell Line embryonic stem cell
13 chr2:190527400-190532000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr2:190527400-190532200 Weak transcription Left Ventricle heart
15 chr2:190527400-190533000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:190527400-190533600 Weak transcription K562 blood
17 chr2:190527400-190537400 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr2:190527400-190538400 Weak transcription Pancreas Pancrea
19 chr2:190527400-190538400 Weak transcription Right Ventricle heart
20 chr2:190527400-190538600 Weak transcription Esophagus oesophagus
21 chr2:190527400-190538600 Weak transcription Gastric stomach
22 chr2:190527400-190539000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr2:190527600-190529400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr2:190527600-190529600 Enhancers Colon Smooth Muscle Colon
25 chr2:190527600-190529800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr2:190527600-190530000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr2:190527600-190530000 Weak transcription NHDF-Ad bronchial
28 chr2:190527600-190530400 Weak transcription Fetal Thymus thymus
29 chr2:190527600-190530600 Weak transcription Fetal Kidney kidney
30 chr2:190527600-190530800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr2:190527600-190530800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr2:190527600-190530800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:190527600-190531000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr2:190527600-190532000 Weak transcription Aorta Aorta
35 chr2:190527600-190532600 Weak transcription Colonic Mucosa Colon
36 chr2:190527600-190532600 Weak transcription Fetal Intestine Small intestine
37 chr2:190527600-190532800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:190527600-190538600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr2:190527600-190538600 Weak transcription Spleen Spleen
40 chr2:190527600-190539200 Weak transcription Small Intestine intestine
41 chr2:190527800-190529200 Weak transcription Primary monocytes fromperipheralblood blood
42 chr2:190527800-190529400 Weak transcription Primary hematopoietic stem cells blood
43 chr2:190527800-190529400 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr2:190527800-190529400 Enhancers Fetal Brain Female brain
45 chr2:190527800-190529400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr2:190527800-190529600 Weak transcription Primary B cells from peripheral blood blood
47 chr2:190527800-190529800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:190527800-190529800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr2:190527800-190529800 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr2:190527800-190530000 Enhancers Primary T cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015