The 2.0 version of rSNPBase

Variant report

Variant rs13415174
Chromosome Location chr2:173473482-173473483
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173431400-173480600 Weak transcription Gastric stomach
2 chr2:173444400-173480200 Strong transcription HepG2 liver
3 chr2:173452000-173479800 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr2:173452800-173478000 Weak transcription Fetal Brain Male brain
5 chr2:173452800-173478600 Weak transcription Spleen Spleen
6 chr2:173453800-173478600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:173454200-173475200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:173454400-173477800 Weak transcription Pancreas Pancrea
9 chr2:173454400-173479800 Weak transcription Esophagus oesophagus
10 chr2:173454400-173489000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr2:173454600-173477800 Weak transcription NHLF lung
12 chr2:173454800-173475200 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr2:173454800-173477800 Weak transcription Colonic Mucosa Colon
14 chr2:173454800-173488200 Weak transcription Muscle Satellite Cultured Cells --
15 chr2:173455200-173480200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr2:173455400-173478400 Weak transcription Fetal Muscle Leg muscle
17 chr2:173457200-173480000 Strong transcription Dnd41 blood
18 chr2:173460800-173479000 Weak transcription H9 Cell Line embryonic stem cell
19 chr2:173461400-173488800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr2:173461400-173504200 Weak transcription NHEK skin
21 chr2:173462200-173474800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr2:173462200-173476600 Weak transcription Fetal Stomach stomach
23 chr2:173462200-173477400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:173462200-173477800 Weak transcription Fetal Muscle Trunk muscle
25 chr2:173462200-173477800 Weak transcription Placenta Placenta
26 chr2:173462200-173478600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr2:173462200-173479600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:173462200-173481200 Weak transcription Brain Anterior Caudate brain
29 chr2:173462200-173481400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr2:173462200-173507400 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr2:173462400-173475400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr2:173462400-173480800 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr2:173462800-173475000 Weak transcription Right Ventricle heart
34 chr2:173462800-173475800 Weak transcription H1 Cell Line embryonic stem cell
35 chr2:173462800-173477600 Weak transcription Fetal Intestine Small intestine
36 chr2:173462800-173477800 Weak transcription Duodenum Mucosa Duodenum
37 chr2:173462800-173478400 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr2:173462800-173479000 Weak transcription Thymus Thymus
39 chr2:173462800-173480800 Weak transcription Fetal Intestine Large intestine
40 chr2:173462800-173482400 Weak transcription Hela-S3 cervix
41 chr2:173462800-173488200 Weak transcription HSMM muscle
42 chr2:173463400-173489400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr2:173464200-173479600 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr2:173464400-173476000 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr2:173464800-173480000 Strong transcription Primary T helper cells PMA-I stimulated --
46 chr2:173465200-173474400 Strong transcription Primary B cells from cord blood blood
47 chr2:173465200-173475200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr2:173465200-173479400 Strong transcription Primary T cells from cord blood blood
49 chr2:173465400-173474600 Strong transcription Primary T cells fromperipheralblood blood
50 chr2:173465400-173480000 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015