The 2.0 version of rSNPBase

Variant report

Variant rs2290564
Chromosome Location chr2:173457903-173457904
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173421800-173465200 Weak transcription Small Intestine intestine
2 chr2:173426200-173460600 Weak transcription HSMMtube muscle
3 chr2:173430600-173461600 Weak transcription Right Ventricle heart
4 chr2:173431400-173480600 Weak transcription Gastric stomach
5 chr2:173432000-173462400 Weak transcription Colon Smooth Muscle Colon
6 chr2:173439800-173458000 Weak transcription NHDF-Ad bronchial
7 chr2:173440200-173458200 Weak transcription Osteobl bone
8 chr2:173440200-173467600 Weak transcription NH-A brain
9 chr2:173443200-173472200 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr2:173443800-173463200 Weak transcription A549 lung
11 chr2:173444000-173464000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr2:173444200-173470400 Weak transcription Psoas Muscle Psoas
13 chr2:173444400-173480200 Strong transcription HepG2 liver
14 chr2:173444600-173465400 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr2:173445200-173463200 Weak transcription Fetal Brain Female brain
16 chr2:173445400-173461000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr2:173445400-173462600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:173445400-173471000 Weak transcription Brain Substantia Nigra brain
19 chr2:173446400-173460400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr2:173447800-173460200 Weak transcription HUVEC blood vessel
21 chr2:173448000-173463400 Weak transcription Stomach Mucosa stomach
22 chr2:173448200-173459000 Weak transcription Brain Germinal Matrix brain
23 chr2:173449400-173460400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:173449400-173462400 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr2:173449800-173462800 Strong transcription Primary B cells from cord blood blood
26 chr2:173451200-173465200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr2:173451600-173462800 Strong transcription Primary T cells from cord blood blood
28 chr2:173451600-173463400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:173451800-173460200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr2:173451800-173471800 Weak transcription Brain Cingulate Gyrus brain
31 chr2:173452000-173460000 Weak transcription Ovary ovary
32 chr2:173452000-173479800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr2:173452200-173462400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:173452200-173463600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr2:173452400-173469400 Weak transcription Lung lung
36 chr2:173452800-173462800 Strong transcription Primary T cells fromperipheralblood blood
37 chr2:173452800-173462800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr2:173452800-173478000 Weak transcription Fetal Brain Male brain
39 chr2:173452800-173478600 Weak transcription Spleen Spleen
40 chr2:173453800-173458200 Weak transcription Placenta Amnion Placenta Amnion
41 chr2:173453800-173459400 Weak transcription Hela-S3 cervix
42 chr2:173453800-173459600 Weak transcription Fetal Muscle Trunk muscle
43 chr2:173453800-173461200 Weak transcription Fetal Heart heart
44 chr2:173453800-173463400 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr2:173453800-173472400 Weak transcription Brain Angular Gyrus brain
46 chr2:173453800-173478600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr2:173454000-173463800 Weak transcription Rectal Smooth Muscle rectum
48 chr2:173454000-173464200 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:173454000-173471600 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:173454200-173459800 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015