Variant report
| Variant | rs59104969 |
|---|---|
| Chromosome Location | chr2:173480117-173480118 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:173431400-173480600 | Weak transcription | Gastric | stomach |
| 2 | chr2:173444400-173480200 | Strong transcription | HepG2 | liver |
| 3 | chr2:173454400-173489000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr2:173454800-173488200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 5 | chr2:173455200-173480200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr2:173461400-173488800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 7 | chr2:173461400-173504200 | Weak transcription | NHEK | skin |
| 8 | chr2:173462200-173481200 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr2:173462200-173481400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr2:173462200-173507400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr2:173462400-173480800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr2:173462800-173480800 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr2:173462800-173482400 | Weak transcription | Hela-S3 | cervix |
| 14 | chr2:173462800-173488200 | Weak transcription | HSMM | muscle |
| 15 | chr2:173463400-173489400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 16 | chr2:173465400-173480600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr2:173465600-173495200 | Weak transcription | Ovary | ovary |
| 18 | chr2:173466000-173483000 | Weak transcription | Left Ventricle | heart |
| 19 | chr2:173468000-173488000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 20 | chr2:173468400-173481000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 21 | chr2:173471200-173480600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 22 | chr2:173471800-173495600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 23 | chr2:173472000-173481200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 24 | chr2:173472400-173488800 | Weak transcription | Fetal Thymus | thymus |
| 25 | chr2:173472600-173481000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 26 | chr2:173472600-173504600 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr2:173474400-173488600 | Weak transcription | Primary B cells from cord blood | blood |
| 28 | chr2:173474400-173489800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 29 | chr2:173474600-173481800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 30 | chr2:173474600-173485200 | Weak transcription | K562 | blood |
| 31 | chr2:173474600-173504400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr2:173475400-173487800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 33 | chr2:173478200-173488200 | Weak transcription | NHLF | lung |
| 34 | chr2:173478400-173480200 | Strong transcription | GM12878-XiMat | blood |
| 35 | chr2:173478800-173480400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 36 | chr2:173478800-173496800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 37 | chr2:173479200-173481000 | Weak transcription | Spleen | Spleen |
| 38 | chr2:173479200-173485600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 39 | chr2:173479400-173483000 | Weak transcription | HMEC | breast |
| 40 | chr2:173479400-173488000 | Weak transcription | Primary T cells from cord blood | blood |
| 41 | chr2:173479400-173488000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 42 | chr2:173479600-173480400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 43 | chr2:173479600-173482400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr2:173479600-173488800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr2:173479600-173489600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr2:173479600-173490200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 47 | chr2:173479600-173495800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 48 | chr2:173479600-173496200 | Weak transcription | Thymus | Thymus |
| 49 | chr2:173479800-173494600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 50 | chr2:173479800-173496000 | Weak transcription | Placenta Amnion | Placenta Amnion |
