Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10242076	0.90[CHB][hapmap];0.90[CHD][hapmap];0.90[JPT][hapmap]
rs10281236	0.84[JPT][hapmap]
rs12703912	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs2022226	0.81[CHB][hapmap];0.92[CHD][hapmap]
rs2620460	0.81[JPT][hapmap]
rs4621717	0.85[ASW][hapmap]
rs4726860	0.84[JPT][hapmap]
rs6464805	0.84[JPT][hapmap]
rs6972045	0.84[JPT][hapmap]
rs700303	0.95[CHB][hapmap];0.90[CHD][hapmap];0.95[JPT][hapmap]
rs7781124	0.83[JPT][hapmap]
rs826808	0.84[JPT][hapmap]
rs826810	0.95[CHB][hapmap];0.90[CHD][hapmap];0.84[JPT][hapmap]
rs826815	0.95[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs826822	0.82[CHD][hapmap];0.84[JPT][hapmap]
rs826824	0.84[JPT][hapmap]
rs826825	0.81[CHB][hapmap];0.90[CHD][hapmap];0.90[JPT][hapmap]
rs826829	0.81[CHB][hapmap];0.82[CHD][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs861160	0.83[JPT][hapmap]
rs9640243	0.90[CHB][hapmap];0.90[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv608954	chr7:147104887-147145576	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv1024540	chr7:147105149-147138125	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147123200-147128200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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